Factsheet for PGSC0003DMT400007578

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g009340.1.1	Tomato	cytosol	97.0	97.0
PGSC0003DMT400007577	Potato	cytosol	85.0	91.64
PGSC0003DMT400007574	Potato	cytosol	67.0	86.17
VIT_11s0065g00140.t01	Wine grape	cytosol	80.75	78.78
AT2G24360.1	Thale cress	cytosol	76.75	74.7
KRH41382	Soybean	nucleus	77.5	74.52
GSMUA_Achr1P23740_001	Banana	cytosol	66.75	74.17
KRH60100	Soybean	cytosol	76.75	73.8
Bra007860.1-P	Field mustard	cytosol, plastid	74.75	73.11
CDY13414	Canola	cytosol	73.25	71.64
CDX72296	Canola	cytosol	73.25	71.64
Zm00001d026267_P002	Maize	cytosol	74.25	71.57
EES12824	Sorghum	cytosol	74.0	71.5
Bra024020.1-P	Field mustard	cytosol	73.0	71.39
Zm00001d002371_P001	Maize	cytosol	74.0	71.33
CDY23284	Canola	cytosol	72.75	71.15
CDY36453	Canola	cytosol	72.75	71.15
CDY28247	Canola	cytosol	73.25	70.94
Bra011250.1-P	Field mustard	cytosol	73.25	70.94
Bra010247.1-P	Field mustard	cytosol	72.5	70.9
AT4G31170.5	Thale cress	cytosol	72.75	70.63
GSMUA_Achr10P...	Banana	cytosol	72.5	70.56
CDY20306	Canola	cytosol	72.25	70.49
CDX68725	Canola	cytosol	72.75	70.46
Bra007859.1-P	Field mustard	cytosol	71.25	70.2
Os04t0608900-01	Rice	cytosol, plasma membrane	74.0	70.14
CDY55245	Canola	cytosol	71.25	69.85
GSMUA_Achr7P15770_001	Banana	cytosol	72.25	69.3
TraesCS7A01G292800.1	Wheat	cytosol	72.0	69.23
TraesCS7B01G182600.1	Wheat	cytosol	72.0	69.23
GSMUA_Achr7P04900_001	Banana	cytosol	71.5	68.75
GSMUA_Achr6P03680_001	Banana	cytosol	71.75	68.66
CDY55246	Canola	plasma membrane, vacuole	75.0	68.65
Os08t0224100-01	Rice	cytosol	71.5	68.59
HORVU7Hr1G068410.1	Barley	cytosol	71.25	68.51
TraesCS7D01G289500.1	Wheat	cytosol	71.25	68.51
GSMUA_Achr4P20740_001	Banana	cytosol	65.25	68.32
EES06353	Sorghum	cytosol	70.0	66.35
Os02t0174200-01	Rice	plasma membrane	69.25	65.8
Zm00001d049361_P004	Maize	cytosol	69.5	65.72
EES13540	Sorghum	cytosol	68.0	65.23
Zm00001d024338_P006	Maize	cytosol	68.75	65.01
HORVU7Hr1G109640.1	Barley	cytosol	69.0	64.94
TraesCS7D01G474700.1	Wheat	cytosol	68.75	64.71
TraesCS7B01G391300.1	Wheat	cytosol	68.5	64.47
TraesCS7A01G488200.1	Wheat	cytosol	68.75	64.4
Os06t0663400-01	Rice	cytosol, plasma membrane	68.75	64.25
TraesCS6D01G145100.2	Wheat	cytosol	67.0	64.11
TraesCS6A01G155200.2	Wheat	cytosol	67.0	64.11
HORVU6Hr1G031440.1	Barley	cytosol	67.25	63.9
Zm00001d053770_P001	Maize	cytosol	55.75	63.17
TraesCS6B01G183300.1	Wheat	cytosol	67.25	63.15
CDY46142	Canola	mitochondrion	72.0	62.88
KXG24726	Sorghum	vacuole	68.0	51.52
PGSC0003DMT400022377	Potato	cytosol	32.0	39.63
PGSC0003DMT400062959	Potato	cytosol, mitochondrion	34.25	39.03
PGSC0003DMT400034519	Potato	cytosol	32.5	38.46
PGSC0003DMT400060698	Potato	cytosol	32.5	38.24
CDY34777	Canola	cytosol	71.25	34.76
PGSC0003DMT400032824	Potato	cytosol	30.5	34.56
Bra032102.1-P	Field mustard	cytosol	71.75	34.41
PGSC0003DMT400033356	Potato	cytosol, plastid	36.25	29.96
PGSC0003DMT400032959	Potato	cytosol	27.5	29.57
PGSC0003DMT400076363	Potato	cytosol	37.25	29.56
PGSC0003DMT400047982	Potato	cytosol	36.0	25.53
PGSC0003DMT400048730	Potato	cytosol	35.0	24.91

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M0ZT80	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG402002925	PGSC:PGSC0003DMG402002925	EnsemblPlants:PGSC0003DMT400007578
PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF601
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294ADC2
SEG:seg	:	:	:	:	:

Description

DSK2 [Source:PGSC_GENE;Acc:PGSC0003DMG402002925]

Coordinates

chr12:-:3046876..3054047

Molecular Weight (calculated)

44792.9 Da

IEP (calculated)

7.612

GRAVY (calculated)

-0.204

Length

400 amino acids

Sequence
(BLAST)

001: MEAPKSFGLT GLNQNLSQSF YHKLGEGSNM STESYGMSNA GGSVAMSVDN SSVGSNDSHT HILNHQDNHI HNNYSVAASI VRRRVSRLSD DALAQALVDP
101: QFPTIGLEIY DEWTIDLRRL TIGQAFAQGS FGKLYKGTYN GEDVAIKLLE RPENDLDRAH LMEQQFQQEV MMLANLKHQN IVRFIGACRK PMVWCIVTEY
201: ARGGSVRQFL TRRQNRAVPL KLAVKQALHV ARGMEYVHGL NLIHRDLKSD NLLIAADKSI KIADFGVARI EVLTEGMTPE TGTYRWMAPE MIQHRSYTQK
301: VDVYSFGIVL WELITGLLPF QNMTAVQAAF AVVNKGVRPT IPIDCLPVLS DIMTCCWDSD PDNRPTFSQV VKMLEAAETE IMTNIRKARF RCCIHPTATG

Best Arabidopsis Sequence Match ( AT2G24360.1 )
(BLAST)

001: MLEGAKFNVL AVGNHHNNDN NYYAFTQEFY QKLNEGSNMS MESMQTSNAG GSVSMSVDNS SVGSSDALIG HPGLKPVRHY SLSVGQSVFR PGRVTHALND
101: DALAQALMDT RYPTEGLTNY DEWTIDLRKL NMGPAFAQGA FGKLYKGTYN GEDVAIKILE RPENSPEKAQ FMEQQFQQEV SMLANLKHPN IVRFIGACRK
201: PMVWCIVTEY AKGGSVRQFL TRRQNRAVPL KLAVKQALDV ARGMAYVHGR NFIHRDLKSD NLLISADKSI KIADFGVARI EVQTEGMTPE TGTYRWMAPE
301: MIQHRAYNQK VDVYSFGIVL WELITGLLPF QNMTAVQAAF AVVNRGVRPT VPNDCLPVLS DIMTRCWDAN PEVRPCFVEV VKLLEAAETE IMTTARKARF
401: RCCLSQPMTI D

Arabidopsis Description

STY13Serine/threonine-protein kinase STY13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.