Factsheet for PGSC0003DMT400007574

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g016100.1.1	Tomato	cytosol	65.92	78.85
Solyc12g009350.1.1	Tomato	cytosol	65.59	78.46
Solyc12g015980.1.1	Tomato	cytosol	64.31	76.92
Solyc12g016140.1.1	Tomato	cytosol	54.66	73.59
Solyc12g016060.1.1	Tomato	cytosol	44.37	71.88
PGSC0003DMT400007578	Potato	cytosol	86.17	67.0
PGSC0003DMT400007577	Potato	cytosol	79.42	66.58
VIT_11s0065g00140.t01	Wine grape	cytosol	72.99	55.37
KRH41382	Soybean	nucleus	70.1	52.4
AT2G24360.1	Thale cress	cytosol	68.81	52.07
KRH60100	Soybean	cytosol	69.13	51.68
Bra007860.1-P	Field mustard	cytosol, plastid	66.56	50.61
CDY13414	Canola	cytosol	65.27	49.63
CDX72296	Canola	cytosol	64.95	49.39
Bra024020.1-P	Field mustard	cytosol	64.95	49.39
CDY20306	Canola	cytosol	64.95	49.27
GSMUA_Achr1P23740_001	Banana	cytosol	56.91	49.17
Zm00001d026267_P002	Maize	cytosol	65.59	49.16
EES12824	Sorghum	cytosol	65.27	49.03
Zm00001d002371_P001	Maize	cytosol	65.27	48.92
CDY36453	Canola	cytosol	64.31	48.9
CDY23284	Canola	cytosol	64.31	48.9
Bra010247.1-P	Field mustard	cytosol	64.31	48.9
AT4G31170.5	Thale cress	cytosol	64.63	48.79
GSMUA_Achr10P...	Banana	cytosol	64.31	48.66
Bra007859.1-P	Field mustard	cytosol	63.34	48.52
CDY28247	Canola	cytosol	64.31	48.43
Bra011250.1-P	Field mustard	cytosol	64.31	48.43
CDY55245	Canola	cytosol	63.34	48.28
CDX68725	Canola	cytosol	63.67	47.94
Os04t0608900-01	Rice	cytosol, plasma membrane	64.95	47.87
GSMUA_Achr7P15770_001	Banana	cytosol	63.99	47.72
CDY55246	Canola	plasma membrane, vacuole	66.88	47.6
Os08t0224100-01	Rice	cytosol	63.67	47.48
TraesCS7A01G292800.1	Wheat	cytosol	63.34	47.36
TraesCS7D01G289500.1	Wheat	cytosol	63.02	47.12
TraesCS7B01G182600.1	Wheat	cytosol	63.02	47.12
GSMUA_Achr7P04900_001	Banana	cytosol	62.7	46.88
GSMUA_Achr6P03680_001	Banana	cytosol	62.7	46.65
HORVU7Hr1G068410.1	Barley	cytosol	62.38	46.63
GSMUA_Achr4P20740_001	Banana	cytosol	56.27	45.81
EES06353	Sorghum	cytosol	61.74	45.5
Zm00001d049361_P004	Maize	cytosol	61.74	45.39
Os02t0174200-01	Rice	plasma membrane	61.09	45.13
Zm00001d024338_P006	Maize	cytosol	61.09	44.92
EES13540	Sorghum	cytosol	59.49	44.36
HORVU7Hr1G109640.1	Barley	cytosol	60.45	44.24
TraesCS6A01G155200.2	Wheat	cytosol	59.16	44.02
TraesCS7D01G474700.1	Wheat	cytosol	60.13	44.0
HORVU6Hr1G031440.1	Barley	cytosol	59.49	43.94
Os06t0663400-01	Rice	cytosol, plasma membrane	60.45	43.93
TraesCS7A01G488200.1	Wheat	cytosol	60.13	43.79
TraesCS6D01G145100.2	Wheat	cytosol	58.84	43.78
TraesCS7B01G391300.1	Wheat	cytosol	59.81	43.76
CDY46142	Canola	mitochondrion	64.31	43.67
TraesCS6B01G183300.1	Wheat	cytosol	59.16	43.19
Zm00001d053770_P001	Maize	cytosol	48.55	42.78
KXG24726	Sorghum	vacuole	59.16	34.85
CDY34777	Canola	cytosol	63.34	24.02
Bra032102.1-P	Field mustard	cytosol	64.31	23.98
PGSC0003DMT400062959	Potato	cytosol, mitochondrion	26.69	23.65
PGSC0003DMT400022377	Potato	cytosol	23.15	22.29
PGSC0003DMT400060698	Potato	cytosol	23.47	21.47
PGSC0003DMT400034519	Potato	cytosol	22.51	20.71
PGSC0003DMT400032824	Potato	cytosol	21.86	19.26
PGSC0003DMT400076363	Potato	cytosol	29.58	18.25
PGSC0003DMT400033356	Potato	cytosol, plastid	28.3	18.18
PGSC0003DMT400032959	Potato	cytosol	21.22	17.74
PGSC0003DMT400047982	Potato	cytosol	27.65	15.25
PGSC0003DMT400048730	Potato	cytosol	27.33	15.12

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102601913	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZT76	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400002923	PGSC:PGSC0003DMG400002923
EnsemblPlants:PGSC0003DMT400007574	PIRSF:PIRSF000615	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF601
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002967B78
RefSeq:XP_015163246.1	SEG:seg	:	:	:	:

Description

DSK2 [Source:PGSC_GENE;Acc:PGSC0003DMG400002923]

Coordinates

chr12:-:3029914..3031102

Molecular Weight (calculated)

34784.9 Da

IEP (calculated)

8.708

GRAVY (calculated)

-0.242

Length

311 amino acids

Sequence
(BLAST)

001: MEAPKFVGLV DLNQNLWQIF YHKLGEGSNM SIEGYGMSNA DGSGAMSVDN SSVGSNDSHT HILNHQGNHI HNNYSVAASV VRGRVSRWSD DALAQALVDP
101: QFPTIGLEIY HEWTIDLRRL TIGQAFALGS FGKLYKGTYN GEDVAIKLLE RPEYDLAKAH FMEHQFQHEV MMLANLKHPN IVRFIGACRK AMVWCILTEY
201: ARGGSVRQFL TRQQNRAVPL KLAVKQVLDV ARGMEHVHGL NLIHRDLKSD NLLIAADKSI KIADFGVARI QVVRMLEAAE TEIMTNIRTA RFRCCPRPTA
301: TGKEETGGKR C

Best Arabidopsis Sequence Match ( AT2G24360.1 )
(BLAST)

001: MLEGAKFNVL AVGNHHNNDN NYYAFTQEFY QKLNEGSNMS MESMQTSNAG GSVSMSVDNS SVGSSDALIG HPGLKPVRHY SLSVGQSVFR PGRVTHALND
101: DALAQALMDT RYPTEGLTNY DEWTIDLRKL NMGPAFAQGA FGKLYKGTYN GEDVAIKILE RPENSPEKAQ FMEQQFQQEV SMLANLKHPN IVRFIGACRK
201: PMVWCIVTEY AKGGSVRQFL TRRQNRAVPL KLAVKQALDV ARGMAYVHGR NFIHRDLKSD NLLISADKSI KIADFGVARI EVQTEGMTPE TGTYRWMAPE
301: MIQHRAYNQK VDVYSFGIVL WELITGLLPF QNMTAVQAAF AVVNRGVRPT VPNDCLPVLS DIMTRCWDAN PEVRPCFVEV VKLLEAAETE IMTTARKARF
401: RCCLSQPMTI D

Arabidopsis Description

STY13Serine/threonine-protein kinase STY13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.