Factsheet for PGSC0003DMT400062959

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

plastid 1
peroxisome 1
nucleus 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g114310.2.1	Tomato	cytosol	98.01	98.01
KRH57063	Soybean	mitochondrion	76.92	76.7
VIT_17s0000g08240.t01	Wine grape	cytosol	77.21	75.7
KRH03300	Soybean	peroxisome	76.35	74.65
KRH63510	Soybean	mitochondrion	75.5	74.23
KRH54406	Soybean	mitochondrion, peroxisome	70.37	72.22
Zm00001d040160_P001	Maize	cytosol	70.94	67.66
EES00452	Sorghum	cytosol	70.94	67.48
TraesCS3A01G001500.1	Wheat	cytosol	70.09	67.4
GSMUA_Achr8P18690_001	Banana	cytosol	67.52	67.33
TraesCS3D01G010000.1	Wheat	cytosol	69.8	67.31
GSMUA_Achr2P22880_001	Banana	cytosol	68.09	67.13
HORVU3Hr1G000350.2	Barley	cytosol, mitochondrion, nucleus	69.52	66.48
TraesCS3B01G000400.1	Wheat	cytosol	69.8	66.04
PGSC0003DMT400060698	Potato	cytosol	52.99	54.71
PGSC0003DMT400034519	Potato	cytosol	52.42	54.44
PGSC0003DMT400007577	Potato	cytosol	38.46	36.39
PGSC0003DMT400022377	Potato	cytosol	31.62	34.37
PGSC0003DMT400007578	Potato	cytosol	39.03	34.25
PGSC0003DMT400033356	Potato	cytosol, plastid	45.3	32.85
PGSC0003DMT400032824	Potato	cytosol	32.76	32.58
PGSC0003DMT400076363	Potato	cytosol	44.44	30.95
PGSC0003DMT400032959	Potato	cytosol	31.34	29.57
PGSC0003DMT400007574	Potato	cytosol	23.65	26.69
PGSC0003DMT400048730	Potato	cytosol	36.18	22.6
PGSC0003DMT400047982	Potato	cytosol	36.18	22.52

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102595845	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1C9V2	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400024500	PGSC:PGSC0003DMG400024500
EnsemblPlants:PGSC0003DMT400062959	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR23257
PANTHER:PTHR23257:SF702	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002956A5E	RefSeq:XP_006345054.1	:	:	:	:

Description

HT1 protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400024500]

Coordinates

chr3:+:54229272..54235041

Molecular Weight (calculated)

39741.8 Da

IEP (calculated)

8.252

GRAVY (calculated)

-0.322

Length

351 amino acids

Sequence
(BLAST)

001: MKNFNWFKQI ANNGKLERRL SLGEYKRAAS WSKYIVSSGA AIKGEGEEEW SADMSQLYIG NKFASGRHSR IYRGIYKHGE VAIKLISQPE EDGDLATFLE
101: KQFTSEVALL LRLKHPNIIT FIAACKKPPV FCIITEYVPG GSLRKYLHQQ EPYSVSLNLV VKLALDIAHG MQYLHAEGIL HRDLKSENLL LDEDMCVKVA
201: DFGISCLESQ CGSAKGFTGT YRWMAPEMIQ EKNHTKKVDV YSFGIVLWEL LTALTPFDDM TPEQAAFAVC QKKARPPIPA ACPSAVRKLI KRCWANNPHK
301: RPHFEEIVTV LESYAEALEQ DPDFFQSYQP PRNFNLSRCL PNCNRSDSAK A

Best Arabidopsis Sequence Match ( AT1G62400.1 )
(BLAST)

001: MSGLCFNPFR LRWSLRSKLP LEPSLPNLPC NPSSSKTNRY AEAETMEKKR FDSMESWSMI LESENVETWE ASKGEREEWT ADLSQLFIGN KFASGAHSRI
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA

Arabidopsis Description

HT1Serine/threonine-protein kinase HT1 [Source:UniProtKB/Swiss-Prot;Acc:Q2MHE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.