Factsheet for VIT_17s0000g08240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57063	Soybean	mitochondrion	78.77	80.11
KRH63510	Soybean	mitochondrion	78.21	78.43
KRH03300	Soybean	peroxisome	78.49	78.27
Solyc03g114310.2.1	Tomato	cytosol	76.26	77.78
PGSC0003DMT400062959	Potato	cytosol, mitochondrion	75.7	77.21
KRH54406	Soybean	mitochondrion, peroxisome	73.74	77.19
GSMUA_Achr2P22880_001	Banana	cytosol	71.23	71.63
GSMUA_Achr8P18690_001	Banana	cytosol	68.44	69.6
Zm00001d040160_P001	Maize	cytosol	70.39	68.48
EES00452	Sorghum	cytosol	70.11	68.02
TraesCS3D01G010000.1	Wheat	cytosol	68.99	67.86
TraesCS3A01G001500.1	Wheat	cytosol	68.99	67.67
HORVU3Hr1G000350.2	Barley	cytosol, mitochondrion, nucleus	68.99	67.3
TraesCS3B01G000400.1	Wheat	cytosol	68.99	66.58
VIT_00s0684g00010.t01	Wine grape	mitochondrion	27.37	42.42
VIT_04s0023g01350.t01	Wine grape	cytosol	23.74	40.28
VIT_08s0058g01180.t01	Wine grape	cytosol	32.68	34.72
VIT_11s0065g00140.t01	Wine grape	cytosol	38.27	33.41
VIT_14s0066g00370.t01	Wine grape	cytosol	32.68	33.24
VIT_17s0000g09290.t01	Wine grape	cytosol	32.68	33.24
VIT_04s0008g03020.t01	Wine grape	cytosol	38.27	32.85
VIT_18s0001g00720.t01	Wine grape	cytosol	33.24	22.8
VIT_18s0166g00290.t01	Wine grape	cytosol	34.36	22.36
VIT_03s0038g03040.t01	Wine grape	cytosol	34.92	21.55
VIT_00s1430g00010.t01	Wine grape	nucleus	1.4	2.16

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100244957	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:AM464618	ProteinID:CAN68094
ProteinID:CAN68094.1	ProteinID:CCB42987	ProteinID:CCB42987.1	UniProt:F6GSR4	EMBL:FN594950	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF702	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002108936	ArrayExpress:VIT_17s0000g08240	EnsemblPlantsGene:VIT_17s0000g08240	EnsemblPlants:VIT_17s0000g08240.t01
RefSeq:XP_010663186.1	:	:	:	:	:

Description

No Description!

Coordinates

chr17:+:9308934..9314042

Molecular Weight (calculated)

40570.8 Da

IEP (calculated)

8.054

GRAVY (calculated)

-0.239

Length

358 amino acids

Sequence
(BLAST)

001: MKNFQWFKKI SNNGIIGKSE GRLSLGEYRR AVSWSKYLVS SGAEIKEEGE GDWSADMSQL FIGCKFASGR HSRIYRGIYK QRDVAIKLIS QPEEDESLAN
101: LLEKQFTSEV ALLFRLRHPN IITFVAACKK PPVFCIITEY LAGGSLRKFL HQQEPYSVPY DLVLKFSLDI ACGMQYLHSQ GILHRDLKSE NLLLGEDMCV
201: KVADFGISCL ETQCGSAKGF TGTYRWMAPE MIKEKHHTKK VDVYSFGIVL WELLTALIPF DNMTPEQAAF AVSQKNARPP LDPACPMAFR HLISRCWSSS
301: ADKRPHFDEI VSILESYSES FKQDPDFFSS YKPSDDHAFL RCLPKCIAAR RSSASLEA

Best Arabidopsis Sequence Match ( AT1G62400.1 )
(BLAST)

001: MSGLCFNPFR LRWSLRSKLP LEPSLPNLPC NPSSSKTNRY AEAETMEKKR FDSMESWSMI LESENVETWE ASKGEREEWT ADLSQLFIGN KFASGAHSRI
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA

Arabidopsis Description

HT1Serine/threonine-protein kinase HT1 [Source:UniProtKB/Swiss-Prot;Acc:Q2MHE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.