Factsheet for VIT_03s0038g03040.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0684g00010.t01	Wine grape	mitochondrion	32.93	82.68
GSMUA_Achr8P34140_001	Banana	extracellular, plasma membrane	38.97	81.59
PGSC0003DMT400048730	Potato	cytosol	75.34	77.76
GSMUA_Achr1P26270_001	Banana	cytosol	30.17	77.09
Solyc01g111880.2.1	Tomato	cytosol	74.48	76.73
PGSC0003DMT400047982	Potato	cytosol	74.48	76.6
Solyc10g055720.1.1	Tomato	cytosol	74.31	76.55
KRH36118	Soybean	cytosol	76.72	76.07
KRG90640	Soybean	plastid	76.03	75.64
AT4G38470.1	Thale cress	cytosol	74.14	74.78
CDY70078	Canola	cytosol	66.55	72.69
Bra010744.1-P	Field mustard	cytosol	70.86	71.73
CDX90274	Canola	cytosol	71.03	71.53
Bra015215.1-P	Field mustard	cytosol	65.69	71.22
CDY12083	Canola	cytosol	70.52	71.01
Bra011897.1-P	Field mustard	cytosol	68.79	70.74
VIT_18s0001g00720.t01	Wine grape	cytosol	63.1	70.11
CDY52799	Canola	cytosol	68.62	69.34
CDY61898	Canola	cytosol	64.83	69.24
CDY38150	Canola	cytosol	64.48	68.5
GSMUA_Achr7P03940_001	Banana	cytosol	52.24	67.94
VIT_00s1430g00010.t01	Wine grape	nucleus	26.21	65.52
GSMUA_Achr1P26280_001	Banana	cytosol	26.03	63.71
VIT_18s0166g00290.t01	Wine grape	cytosol	49.14	51.82
VIT_04s0023g01350.t01	Wine grape	cytosol	14.48	39.81
VIT_08s0058g01180.t01	Wine grape	cytosol	21.55	37.09
VIT_04s0008g03020.t01	Wine grape	cytosol	25.34	35.25
VIT_11s0065g00140.t01	Wine grape	cytosol	24.83	35.12
VIT_17s0000g08240.t01	Wine grape	cytosol	21.55	34.92
VIT_17s0000g09290.t01	Wine grape	cytosol	20.17	33.24
VIT_14s0066g00370.t01	Wine grape	cytosol	19.83	32.67

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100246860	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:ACT_dom	ProteinID:CBI37812
ProteinID:CBI37812.3	ncoils:Coil	UniProt:D7U4Z3	EMBL:FN596508	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009658
GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:IPR002912	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PRINTS:PR00109	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51671	PANTHER:PTHR44012	PANTHER:PTHR44012:SF1	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF55021	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC54019	UniParc:UPI00015C8697
ArrayExpress:VIT_03s0038g03040	EnsemblPlantsGene:VIT_03s0038g03040	EnsemblPlants:VIT_03s0038g03040.t01	unigene:Vvi.6770	RefSeq:XP_010646465.1	SEG:seg

Description

No Description!

Coordinates

chr3:-:2141254..2162029

Molecular Weight (calculated)

65537.4 Da

IEP (calculated)

5.747

GRAVY (calculated)

-0.507

Length

580 amino acids

Sequence
(BLAST)

001: MVMEDNESCS SRVHDSSSPA QSRQQRQKLE VYNEVLRRLK DSDNEEAFEP GFDEELWAHF VRLPTRYALD VNVERAEDVL THKRLLHLAH DPTNRPAIEV
101: RLVQVHPISD GIHGNIADSI HSNSPTIGPA HGSPKYSSKQ SILPPPAFGS SPNLEALAIE ANNSHVQDGD GDDSVHASSQ YSRPMHEITF SSDDKPKLLS
201: QLTCLLSELE LNIQEAHAFS TVDGYSLDVF VVDGWPYEET EQLRTALEKE VFKIEKQSWP NHHSLSPTGE QEETGIKCES DFVTIPNDGT DVWEIDVRQL
301: KFENKVASGS YGDLYKGTYC SQEVAIKVLK PERLNSDMQK EFAQEVFIMR KVRHKNVVQF IGACTRPPSL YIVTEFMSGG SVYDYLHKQK GVFKLPALLK
401: VSIDVSKGMN YLHQNNIIHR DLKAANLLMD ENEVVKVADF GVARVKAQSG VMTAETGTYR WMAPEVIEHK PYDHKADVFS FGIVLWELLT GKLPYEYLTP
501: LQAAVGVVQK GLRPTMPKNT HPKLAELLER CWQQDPTLRP DFSEIIEILQ QIAKEVGDEE DRRKEKSSSG FLSVLRRGHH

Best Arabidopsis Sequence Match ( AT4G38470.1 )
(BLAST)

001: MVMEDNESCA SRVIFDALPT SQATMDRRER IKMEVFDEVL RRLRQSDIED AHLPGFEDDL WNHFNRLPAR YALDVNVERA EDVLMHKRLL HSAYDPQNRP
101: AIEVHLVQVQ PAGISADLDS TSNDAGHSSP TRKSIHPPPA FGSSPNLEAL ALAASLSQDE DADNSVHNNS LYSRPLHEIT FSTEDKPKLL FQLTALLAEL
201: GLNIQEAHAF STTDGYSLDV FVVDGWPYEE TERLRISLEK EAAKIELQSQ SWPMQQSFSP EKENGQTGAR THVPIPNDGT DVWEINLKHL KFGHKIASGS
301: YGDLYKGTYC SQEVAIKVLK PERLDSDLEK EFAQEVFIMR KVRHKNVVQF IGACTKPPHL CIVTEFMPGG SVYDYLHKQK GVFKLPTLFK VAIDICKGMS
401: YLHQNNIIHR DLKAANLLMD ENEVVKVADF GVARVKAQTG VMTAETGTYR WMAPEVIEHK PYDHKADVFS YGIVLWELLT GKLPYEYMTP LQAAVGVVQK
501: GLRPTIPKNT HPKLAELLER LWEHDSTQRP DFSEIIEQLQ EIAKEVGEEG EEKKKSSTGL GGGIFAALRR STTHH

Arabidopsis Description

STY46Serine/threonine-protein kinase STY46 [Source:UniProtKB/Swiss-Prot;Acc:F4JTP5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.