Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_08s0007g01720.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G50180.1 | VIT_08s0007g01720.t01 | AT3G54120.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0066g00370.t01 | Wine grape | cytosol | 87.78 | 87.78 |
| PGSC0003DMT400032824 | Potato | cytosol | 85.8 | 85.55 |
| KRH54319 | Soybean | cytosol | 85.51 | 85.51 |
| Solyc02g093410.2.1 | Tomato | cytosol | 85.23 | 84.99 |
| KRH63627 | Soybean | cytosol | 84.38 | 84.38 |
| KXG27334 | Sorghum | cytosol | 80.4 | 82.51 |
| Os02t0594100-01 | Rice | cytosol | 82.1 | 82.1 |
| Zm00001d050947_P007 | Maize | cytosol | 82.1 | 81.87 |
| AT5G50180.1 | Thale cress | cytosol | 80.4 | 81.79 |
| GSMUA_Achr6P06670_001 | Banana | cytosol | 81.53 | 81.53 |
| TraesCS6D01G192100.1 | Wheat | cytosol | 80.97 | 81.43 |
| TraesCS6A01G208500.1 | Wheat | cytosol | 80.97 | 81.43 |
| HORVU6Hr1G053310.1 | Barley | cytosol | 80.97 | 80.97 |
| TraesCS6B01G237600.2 | Wheat | cytosol | 80.97 | 80.51 |
| EES05353 | Sorghum | cytosol | 80.4 | 80.4 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.58 | 80.28 |
| CDY64638 | Canola | cytosol | 79.83 | 80.06 |
| Bra000612.1-P | Field mustard | cytosol | 79.83 | 80.06 |
| CDY34048 | Canola | cytosol | 79.83 | 80.06 |
| GSMUA_Achr9P01860_001 | Banana | cytosol | 78.41 | 78.63 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.24 | 75.0 |
| VIT_08s0058g01180.t01 | Wine grape | cytosol | 57.95 | 60.53 |
| VIT_04s0023g01350.t01 | Wine grape | cytosol | 32.67 | 54.5 |
| VIT_00s0684g00010.t01 | Wine grape | mitochondrion | 24.72 | 37.66 |
| VIT_17s0000g08240.t01 | Wine grape | cytosol | 33.24 | 32.68 |
| VIT_11s0065g00140.t01 | Wine grape | cytosol | 34.94 | 30.0 |
| VIT_04s0008g03020.t01 | Wine grape | cytosol | 35.51 | 29.98 |
| VIT_18s0166g00290.t01 | Wine grape | cytosol | 32.39 | 20.73 |
| VIT_18s0001g00720.t01 | Wine grape | cytosol | 30.11 | 20.31 |
| VIT_03s0038g03040.t01 | Wine grape | cytosol | 33.24 | 20.17 |
| VIT_00s1430g00010.t01 | Wine grape | nucleus | 0.85 | 1.29 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:100243394 | wikigene:100243394 | MapMan:18.4.1.30 | Gene3D:3.30.200.20 | UniProt:A5BI87 |
| EMBL:AM460354 | ProteinID:CAN63533 | ProteinID:CAN63533.1 | ProteinID:CBI14949 | ProteinID:CBI14949.3 | EMBL:FN594950 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0004871 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0035556 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf |
| EntrezGene:LOC100243394 | wikigene:LOC100243394 | PFAM:PF07714 | PIRSF:PIRSF000654 | PRINTS:PR00109 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR44258 | PANTHER:PTHR44258:SF2 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0001521168 | ArrayExpress:VIT_17s0000g09290 |
| EnsemblPlantsGene:VIT_17s0000g09290 | EnsemblPlants:VIT_17s0000g09290.t01 | RefSeq:XP_002280504 | RefSeq:XP_002280504.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr17:+:10875253..10877438
Molecular Weight (calculated)
39959.4 Da
IEP (calculated)
8.149
GRAVY (calculated)
-0.276
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MESGNRFYSV DEFHLDPKWL IDPKHLFVGP RIGEGAHAKV YEGKYKNQNV AIKIVHRGET PEEITKREAR FAREVSMLSR VQHKNLAKFI GVCKEPVMVI
101: VTELLLGGTL RKYLLNMRPR CLDARIAVGF ALDIARAMEC LHSHGIIHRD LKPENLILTA DHKTVKLVDF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRHGEKKHY NNKVDAYSFA IVLWELLHNK LPFEGMSNLQ AAYAAAFKNV RPSAENLPEE LAIILTSCWK EDPNARPNFS QIVQMLLHYL STISPPEPAI
301: PSRVFASENT ILPPESPGTS SLMAVRDDSG ETPKVKMENK PKGFFFCFNQ CY
101: VTELLLGGTL RKYLLNMRPR CLDARIAVGF ALDIARAMEC LHSHGIIHRD LKPENLILTA DHKTVKLVDF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRHGEKKHY NNKVDAYSFA IVLWELLHNK LPFEGMSNLQ AAYAAAFKNV RPSAENLPEE LAIILTSCWK EDPNARPNFS QIVQMLLHYL STISPPEPAI
301: PSRVFASENT ILPPESPGTS SLMAVRDDSG ETPKVKMENK PKGFFFCFNQ CY
001: MDSLTGFRME PKWQIDPQLL FVGPKIGEGA HAKVYEGKYK NQTVAIKIVH RGETPEEIAK RDSRFLREVE MLSRVQHKNL VKFIGACKEP VMVIVTELLQ
101: GGTLRKYLLN LRPACLETRV AIGFALDIAR GMECLHSHGI IHRDLKPENL LLTADHKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRLGE
201: KKHYNHKVDA YSFAIVLWEL LHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEELGDIVT SCWNEDPNAR PNFTHIIELL LNYLSKVGSP ISAIPQRILA
301: SKNTLLPPDS PGTSSLMAKL DECGETPKAK SEDKRKGLFF CFNQCY
101: GGTLRKYLLN LRPACLETRV AIGFALDIAR GMECLHSHGI IHRDLKPENL LLTADHKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRLGE
201: KKHYNHKVDA YSFAIVLWEL LHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEELGDIVT SCWNEDPNAR PNFTHIIELL LNYLSKVGSP ISAIPQRILA
301: SKNTLLPPDS PGTSSLMAKL DECGETPKAK SEDKRKGLFF CFNQCY
Arabidopsis Description
At5g50180 [Source:UniProtKB/TrEMBL;Acc:Q9FGS7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.