CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95394
KRH66004
KRH67075
KRH75801

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50180.1	KRH66004	AT3G54120.1	21798944
AT5G50180.1	KRH75801	AT3G54120.1	21798944
AT5G50180.1	KRG95394	AT4G01920.1	21798944
AT5G50180.1	KRH67075	AT4G01920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54319	Soybean	cytosol	97.16	97.16
VIT_17s0000g09290.t01	Wine grape	cytosol	84.38	84.38
PGSC0003DMT400032824	Potato	cytosol	82.39	82.15
KRH56528	Soybean	cytosol	80.4	81.79
Solyc02g093410.2.1	Tomato	cytosol	81.82	81.59
KRG93193	Soybean	cytosol	71.02	80.39
AT5G50180.1	Thale cress	cytosol	78.69	80.06
KRH07131	Soybean	cytosol	78.98	79.66
KRG94025	Soybean	cytosol	78.69	79.6
KXG27334	Sorghum	cytosol	76.7	78.72
Bra000612.1-P	Field mustard	cytosol	78.12	78.35
CDY34048	Canola	cytosol	78.12	78.35
CDY64638	Canola	cytosol	78.12	78.35
Zm00001d050947_P007	Maize	cytosol	78.41	78.19
GSMUA_Achr6P06670_001	Banana	cytosol	77.56	77.56
Os02t0594100-01	Rice	cytosol	77.56	77.56
GSMUA_Achr9P01860_001	Banana	cytosol	76.99	77.21
TraesCS6D01G192100.1	Wheat	cytosol	76.7	77.14
TraesCS6A01G208500.1	Wheat	cytosol	76.7	77.14
HORVU6Hr1G053310.1	Barley	cytosol	76.7	76.7
GSMUA_AchrUn_...	Banana	cytosol	46.31	76.53
EES05353	Sorghum	cytosol	76.42	76.42
TraesCS6B01G237600.2	Wheat	cytosol	76.7	76.27
GSMUA_AchrUn_...	Banana	cytosol	33.52	75.64
KRH40751	Soybean	cytosol	59.09	56.22
KRH76113	Soybean	cytosol	57.1	54.18
KRH65437	Soybean	cytosol	57.1	54.18
KRH13899	Soybean	cytosol	33.24	35.67
KRH13893	Soybean	cytosol	33.24	35.67
KRH57063	Soybean	mitochondrion	35.51	35.51
KRH43461	Soybean	cytosol	32.95	35.37
KRH08313	Soybean	cytosol	39.49	35.01
KRH63510	Soybean	mitochondrion	35.23	34.73
KRH03300	Soybean	peroxisome	35.23	34.54
KRH27396	Soybean	cytosol	26.42	34.32
KRH54406	Soybean	mitochondrion, peroxisome	33.24	34.21
KRH36528	Soybean	mitochondrion	34.94	32.63
KRH11513	Soybean	mitochondrion	34.94	32.54
KRH02003	Soybean	mitochondrion	34.94	32.28
KRH51152	Soybean	mitochondrion	34.94	32.28
KRH41382	Soybean	nucleus	34.38	29.09
KRH60100	Soybean	cytosol	34.38	29.09
KRH10889	Soybean	cytosol	33.24	25.32
KRH21427	Soybean	cytosol	33.24	25.27
KRH50054	Soybean	cytosol, plastid	33.52	23.69
KRH20446	Soybean	cytosol, plastid	32.67	23.28
KRH36118	Soybean	cytosol	35.23	21.2
KRG90640	Soybean	plastid	34.66	20.93
KRH60972	Soybean	cytosol	31.53	20.86
KRH76579	Soybean	cytosol	33.52	20.67
KRG91637	Soybean	cytosol	31.53	19.93
KRH35162	Soybean	cytosol	32.67	19.73
KRH28871	Soybean	cytosol	32.95	18.71

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100804884	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:ACUP02002704	EnsemblPlantsGene:GLYMA_04G188200
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1JXB8	InterPro:IPR000719
EnsemblPlants:KRH63627	ProteinID:KRH63627	ProteinID:KRH63627.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44258	PANTHER:PTHR44258:SF2
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000233A978	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:45908544..45913639

Molecular Weight (calculated)

39789.0 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.317

Length

352 amino acids

Sequence
(BLAST)

001: MESGGRFYSV DEFRLDPKWL IDPNHLFVGP QIGEGAHAKV YEGKYKNQTV AFKIVHKGET TEDIAKREGR FAREVAMLSR VQHKNLVKFI GACKEPVMVI
101: VTELLLGGTL RKYLLSMRPK CLDRHVAIGY ALDIARAMEC LHSHGIIHRD LKPDNLLLTE DQKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRQGEKKHY NHKVDAYSFA IVLWELLHNK VPFEGMSNLQ AAYAAAFKNV RPSAENLPEE LAVILTSCWQ EDSNARPNFT QIIQMLLNYL YTVAPPEPMT
301: PSRIFNSENT VLPPESPGTS SLMAKRDGTG DTPRAKDEIK PNGFLCCFSQ CY

Best Arabidopsis Sequence Match ( AT5G50180.1 )
(BLAST)

001: MDSLTGFRME PKWQIDPQLL FVGPKIGEGA HAKVYEGKYK NQTVAIKIVH RGETPEEIAK RDSRFLREVE MLSRVQHKNL VKFIGACKEP VMVIVTELLQ
101: GGTLRKYLLN LRPACLETRV AIGFALDIAR GMECLHSHGI IHRDLKPENL LLTADHKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRLGE
201: KKHYNHKVDA YSFAIVLWEL LHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEELGDIVT SCWNEDPNAR PNFTHIIELL LNYLSKVGSP ISAIPQRILA
301: SKNTLLPPDS PGTSSLMAKL DECGETPKAK SEDKRKGLFF CFNQCY

Arabidopsis Description

At5g50180 [Source:UniProtKB/TrEMBL;Acc:Q9FGS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.