CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95394
KRH66004
KRH67075
KRH75801

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50180.1	KRH66004	AT3G54120.1	21798944
AT5G50180.1	KRH75801	AT3G54120.1	21798944
AT5G50180.1	KRG95394	AT4G01920.1	21798944
AT5G50180.1	KRH67075	AT4G01920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63627	Soybean	cytosol	97.16	97.16
VIT_17s0000g09290.t01	Wine grape	cytosol	85.51	85.51
PGSC0003DMT400032824	Potato	cytosol	83.81	83.57
Solyc02g093410.2.1	Tomato	cytosol	83.24	83.0
KRH56528	Soybean	cytosol	80.97	82.37
KRG93193	Soybean	cytosol	72.16	81.67
AT5G50180.1	Thale cress	cytosol	79.55	80.92
KRH07131	Soybean	cytosol	80.11	80.8
KRG94025	Soybean	cytosol	79.83	80.75
KXG27334	Sorghum	cytosol	78.41	80.47
Zm00001d050947_P007	Maize	cytosol	80.11	79.89
Bra000612.1-P	Field mustard	cytosol	79.26	79.49
CDY34048	Canola	cytosol	79.26	79.49
CDY64638	Canola	cytosol	79.26	79.49
Os02t0594100-01	Rice	cytosol	79.26	79.26
GSMUA_Achr6P06670_001	Banana	cytosol	78.98	78.98
TraesCS6A01G208500.1	Wheat	cytosol	78.41	78.86
TraesCS6D01G192100.1	Wheat	cytosol	78.41	78.86
GSMUA_Achr9P01860_001	Banana	cytosol	78.41	78.63
HORVU6Hr1G053310.1	Barley	cytosol	78.41	78.41
EES05353	Sorghum	cytosol	78.12	78.12
TraesCS6B01G237600.2	Wheat	cytosol	78.41	77.97
GSMUA_AchrUn_...	Banana	cytosol	46.88	77.46
GSMUA_AchrUn_...	Banana	cytosol	33.81	76.28
KRH40751	Soybean	cytosol	60.23	57.3
KRH76113	Soybean	cytosol	57.95	54.99
KRH65437	Soybean	cytosol	57.95	54.99
KRH13893	Soybean	cytosol	33.81	36.28
KRH13899	Soybean	cytosol	33.81	36.28
KRH57063	Soybean	mitochondrion	36.08	36.08
KRH43461	Soybean	cytosol	33.24	35.67
KRH08313	Soybean	cytosol	40.06	35.52
KRH63510	Soybean	mitochondrion	35.8	35.29
KRH03300	Soybean	peroxisome	35.8	35.1
KRH54406	Soybean	mitochondrion, peroxisome	33.81	34.8
KRH27396	Soybean	cytosol	26.7	34.69
KRH36528	Soybean	mitochondrion	35.23	32.89
KRH11513	Soybean	mitochondrion	35.23	32.8
KRH51152	Soybean	mitochondrion	35.23	32.55
KRH02003	Soybean	mitochondrion	35.23	32.55
KRH41382	Soybean	nucleus	34.94	29.57
KRH60100	Soybean	cytosol	34.94	29.57
KRH10889	Soybean	cytosol	34.09	25.97
KRH21427	Soybean	cytosol	34.09	25.92
KRH50054	Soybean	cytosol, plastid	34.38	24.3
KRH20446	Soybean	cytosol, plastid	33.52	23.89
KRH36118	Soybean	cytosol	36.08	21.71
KRG90640	Soybean	plastid	35.51	21.44
KRH60972	Soybean	cytosol	31.53	20.86
KRH76579	Soybean	cytosol	33.81	20.84
KRG91637	Soybean	cytosol	32.1	20.29
KRH35162	Soybean	cytosol	33.52	20.24
KRH28871	Soybean	cytosol	33.24	18.87

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100796593	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:ACUP02003514	EnsemblPlantsGene:GLYMA_06G177700
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1KCB5	InterPro:IPR000719
EnsemblPlants:KRH54319	ProteinID:KRH54319	ProteinID:KRH54319.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44258	PANTHER:PTHR44258:SF2
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000233AA60	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:15034102..15038046

Molecular Weight (calculated)

39873.2 Da

IEP (calculated)

6.899

GRAVY (calculated)

-0.284

Length

352 amino acids

Sequence
(BLAST)

001: MESGDMFYSV DEFRLDPKWL IDPKHLFVGP QIGEGAHAKV YEGKYKNQTV AIKIVHKGET TEDIAKREGR FAREVAMLSR VQHKNLVKFI GACKEPVMVI
101: VTELLLGGTL RKYLFSMRPK CLDRHVAIGF ALDIARAMEC LHSHGIIHRD LKPDNLLLTE DQKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRQGEKKHY NHKVDAYSFA IVLWELLHNK VPFEGMSNLQ AAYAAAFKNV RPSAENLPEE LAVILTSCWQ EDPNARPNFT QIIQMLLNYL YTVAPPEPMI
301: PSRIFSSENT VLPPESPGTS SLMAKRDDTG DTPRAKDEIK PNGFLCCFSQ CY

Best Arabidopsis Sequence Match ( AT5G50180.1 )
(BLAST)

001: MDSLTGFRME PKWQIDPQLL FVGPKIGEGA HAKVYEGKYK NQTVAIKIVH RGETPEEIAK RDSRFLREVE MLSRVQHKNL VKFIGACKEP VMVIVTELLQ
101: GGTLRKYLLN LRPACLETRV AIGFALDIAR GMECLHSHGI IHRDLKPENL LLTADHKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRLGE
201: KKHYNHKVDA YSFAIVLWEL LHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEELGDIVT SCWNEDPNAR PNFTHIIELL LNYLSKVGSP ISAIPQRILA
301: SKNTLLPPDS PGTSSLMAKL DECGETPKAK SEDKRKGLFF CFNQCY

Arabidopsis Description

At5g50180 [Source:UniProtKB/TrEMBL;Acc:Q9FGS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.