Factsheet for HORVU6Hr1G053310.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40540.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT5G40540.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT5G40540.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT5G40540.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT5G40540.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT5G40540.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT5G40540.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT5G40540.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G208500.1	Wheat	cytosol	99.15	99.71
TraesCS6D01G192100.1	Wheat	cytosol	98.86	99.43
TraesCS6B01G237600.2	Wheat	cytosol	99.15	98.59
Os02t0594100-01	Rice	cytosol	94.03	94.03
Zm00001d050947_P007	Maize	cytosol	93.47	93.2
KXG27334	Sorghum	cytosol	89.77	92.13
EES05353	Sorghum	cytosol	90.34	90.34
GSMUA_AchrUn_...	Banana	cytosol	50.57	83.57
GSMUA_Achr6P06670_001	Banana	cytosol	83.52	83.52
GSMUA_Achr9P01860_001	Banana	cytosol	81.53	81.77
VIT_17s0000g09290.t01	Wine grape	cytosol	80.97	80.97
VIT_14s0066g00370.t01	Wine grape	cytosol	79.26	79.26
Solyc02g093410.2.1	Tomato	cytosol	78.98	78.75
PGSC0003DMT400032824	Potato	cytosol	78.69	78.47
KRH54319	Soybean	cytosol	78.41	78.41
GSMUA_AchrUn_...	Banana	cytosol	34.09	76.92
KRH63627	Soybean	cytosol	76.7	76.7
KRG93193	Soybean	cytosol	67.61	76.53
AT5G50180.1	Thale cress	cytosol	74.43	75.72
KRH07131	Soybean	cytosol	74.43	75.07
CDY42570	Canola	cytosol	74.43	75.07
KRG94025	Soybean	cytosol	74.15	75.0
CDY36362	Canola	cytosol	74.15	74.79
Bra025563.1-P	Field mustard	cytosol	73.86	74.5
CDY34048	Canola	cytosol	74.15	74.36
Bra000612.1-P	Field mustard	cytosol	74.15	74.36
CDY64638	Canola	cytosol	74.15	74.36
KRH56528	Soybean	cytosol	72.73	73.99
AT5G40540.1	Thale cress	cytosol	73.58	73.37
CDY13723	Canola	cytosol	73.01	72.19
Bra025286.1-P	Field mustard	cytosol	72.44	71.63
AT3G27560.1	Thale cress	cytosol	71.59	70.79
CDX83708	Canola	cytosol	71.02	68.68
HORVU5Hr1G111670.1	Barley	cytosol	56.82	47.73
HORVU3Hr1G000350.2	Barley	cytosol, mitochondrion, nucleus	32.95	31.61
HORVU7Hr1G092030.2	Barley	mitochondrion	33.81	30.05
HORVU6Hr1G031440.1	Barley	cytosol	35.51	29.69
HORVU7Hr1G109640.1	Barley	cytosol	35.23	29.18
HORVU0Hr1G015980.4	Barley	cytosol	32.67	28.97
HORVU7Hr1G068410.1	Barley	cytosol	34.09	28.85
HORVU5Hr1G040040.6	Barley	cytosol	30.97	23.85
HORVU6Hr1G012800.9	Barley	cytosol	32.95	21.44
HORVU1Hr1G076110.1	Barley	nucleus	33.52	19.63
HORVU2Hr1G124530.4	Barley	cytosol	30.97	19.57
HORVU7Hr1G078170.32	Barley	cytosol	30.68	19.08
HORVU3Hr1G026870.1	Barley	cytosol	30.68	18.75
HORVU3Hr1G071240.2	Barley	cytosol	30.97	18.11
HORVU2Hr1G108060.1	Barley	cytosol, plastid	5.68	5.87

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:AK362440	UniProt:F2DEX3	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G053310	EnsemblPlants:HORVU6Hr1G053310.1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44258	PANTHER:PTHR44258:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000200616D	SEG:seg	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DEX3]

Coordinates

chrchr6H:+:331583539..331590126

Molecular Weight (calculated)

39665.0 Da

IEP (calculated)

7.179

GRAVY (calculated)

-0.231

Length

352 amino acids

Sequence
(BLAST)

001: MEMESGSTFY AGEGLHIDPS WLIDPKLLFV GPRIGEGGHA KVYEGKYKNQ NVAIKIVHKG DTPEEVVKRQ GRFLREVTML SRVQHKNLVK FIGACLEPVM
101: VVVTELLVGG SLRKYLVSLR PRNLEPRVAV GFALDIARAM ECLHAHGIIH RDLKPENLLL TADQRTVKLV DLGLAREETL TEMMTAETGT YRWMAPELYS
201: TVTLRHGEKK HYNHKVDVYS FAIVLWELLH NRLPFEGMSN LQAAYAAAFK NIRPSADNLP EELSEILTSC WKEDPSDRPN FTQIVQMLLH YLSTLSPPEH
301: MAPARTFSSE NAILPPESPG TSSLMASRGD ITPKGNIEDK PRGFFFCFSQ CY

Best Arabidopsis Sequence Match ( AT5G50180.1 )
(BLAST)

001: MDSLTGFRME PKWQIDPQLL FVGPKIGEGA HAKVYEGKYK NQTVAIKIVH RGETPEEIAK RDSRFLREVE MLSRVQHKNL VKFIGACKEP VMVIVTELLQ
101: GGTLRKYLLN LRPACLETRV AIGFALDIAR GMECLHSHGI IHRDLKPENL LLTADHKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRLGE
201: KKHYNHKVDA YSFAIVLWEL LHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEELGDIVT SCWNEDPNAR PNFTHIIELL LNYLSKVGSP ISAIPQRILA
301: SKNTLLPPDS PGTSSLMAKL DECGETPKAK SEDKRKGLFF CFNQCY

Arabidopsis Description

At5g50180 [Source:UniProtKB/TrEMBL;Acc:Q9FGS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.