Factsheet for Solyc02g093410.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc09g013110.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40540.1	Solyc01g008950.2.1	AT2G41100.1	17360592
AT5G40540.1	Solyc10g077010.1.1	AT2G41100.1	17360592
AT5G40540.1	Solyc10g081170.1.1	AT2G41100.1	17360592
AT5G40540.1	Solyc11g072240.1.1	AT2G41100.1	17360592
AT5G40540.1	Solyc12g099990.1.1	AT2G41100.1	17360592
AT5G40540.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT5G40540.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT5G50180.1	Solyc09g013110.2.1	AT3G54120.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032824	Potato	cytosol	99.15	99.15
VIT_14s0066g00370.t01	Wine grape	cytosol	89.52	89.77
VIT_17s0000g09290.t01	Wine grape	cytosol	84.99	85.23
KRH56528	Soybean	cytosol	82.72	84.39
KRG93193	Soybean	cytosol	73.94	83.92
KRH54319	Soybean	cytosol	83.0	83.24
KRG94025	Soybean	cytosol	81.87	83.05
KRH07131	Soybean	cytosol	81.3	82.23
AT5G50180.1	Thale cress	cytosol	80.45	82.08
KRH63627	Soybean	cytosol	81.59	81.82
Bra000612.1-P	Field mustard	cytosol	80.74	81.2
CDY34048	Canola	cytosol	80.74	81.2
CDY64638	Canola	cytosol	80.74	81.2
GSMUA_Achr6P06670_001	Banana	cytosol	80.17	80.4
KXG27334	Sorghum	cytosol	77.9	80.17
AT5G40540.1	Thale cress	cytosol	79.89	79.89
CDY36362	Canola	cytosol	78.75	79.66
Os02t0594100-01	Rice	cytosol	79.32	79.55
TraesCS6D01G192100.1	Wheat	cytosol	78.75	79.43
TraesCS6A01G208500.1	Wheat	cytosol	78.75	79.43
Bra025563.1-P	Field mustard	cytosol	78.47	79.37
Zm00001d050947_P007	Maize	cytosol	79.32	79.32
CDY42570	Canola	cytosol	78.19	79.08
HORVU6Hr1G053310.1	Barley	cytosol	78.75	78.98
CDY13723	Canola	cytosol	79.6	78.93
AT3G27560.1	Thale cress	cytosol	79.32	78.65
TraesCS6B01G237600.2	Wheat	cytosol	78.75	78.53
Bra025286.1-P	Field mustard	cytosol	79.04	78.37
GSMUA_Achr9P01860_001	Banana	cytosol	77.9	78.35
GSMUA_AchrUn_...	Banana	cytosol	47.03	77.93
EES05353	Sorghum	cytosol	77.34	77.56
GSMUA_AchrUn_...	Banana	cytosol	33.14	75.0
CDX83708	Canola	cytosol	77.05	74.73
Solyc09g018060.2.1	Tomato	cytosol	50.99	58.06
Solyc02g085620.2.1	Tomato	cytosol	43.63	41.51
Solyc12g016060.1.1	Tomato	cytosol	20.68	38.02
Solyc04g014690.2.1	Tomato	mitochondrion	37.11	34.75
Solyc11g012050.1.1	Tomato	mitochondrion	35.41	33.42
Solyc03g114310.2.1	Tomato	cytosol	32.58	32.76
Solyc12g016140.1.1	Tomato	cytosol	20.96	32.03
Solyc12g009340.1.1	Tomato	cytosol	35.41	31.25
Solyc07g042680.2.1	Tomato	cytosol	36.26	31.07
Solyc07g042890.2.1	Tomato	cytosol	36.26	31.07
Solyc12g009350.1.1	Tomato	cytosol	22.1	30.0
Solyc12g016100.1.1	Tomato	cytosol	22.1	30.0
Solyc12g015980.1.1	Tomato	cytosol	20.96	28.46
Solyc03g006400.2.1	Tomato	cytosol	33.71	24.79
Solyc02g078140.2.1	Tomato	cytosol	34.28	24.01
Solyc01g111880.2.1	Tomato	cytosol	34.56	21.67
Solyc10g055720.1.1	Tomato	cytosol	34.28	21.49
Solyc04g071120.2.1	Tomato	cytosol	32.29	21.07
Solyc12g094410.1.1	Tomato	cytosol	32.58	20.21
Solyc02g083290.2.1	Tomato	cytosol	32.01	20.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	UniProt:K4BDD7	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44258	PANTHER:PTHR44258:SF2
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc02g093410.2	EnsemblPlants:Solyc02g093410.2.1	UniParc:UPI00027684FD	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:+:54286675..54290531

Molecular Weight (calculated)

39888.2 Da

IEP (calculated)

7.386

GRAVY (calculated)

-0.269

Length

353 amino acids

Sequence
(BLAST)

001: MGSANGFYSG EEEFNLEAKW LIDPKLLFVG PKIGEGAHAK VYEGKYRNQN VAIKIVHKGE TPEEIAKRES RFGREVAMLS RVQHKNLVKF IGACKEPVMV
101: IVTELLLGGT LRKYLLNLRP RCLDTGVAIR FALDIARAME CLHSHGIIHR DLKPENLLLT ADHKTVKLAD FGLAREESLT EMMTAETGTY RWMAPELYST
201: VTLRHGEKKH YNHKVDAYSF AIVLWELVHN KLPFEGMSNL QAAYAAAFKN VRPSADDLPE DLAVIVTSCW KEDPNTRPNF TQIIQMLLHF LSSVSPPEPV
301: IPARIFTSEN HVLPPESPGT SSLMSKRDDS VETPKTPMEN QPRGFFFCFN QCY

Best Arabidopsis Sequence Match ( AT5G50180.1 )
(BLAST)

001: MDSLTGFRME PKWQIDPQLL FVGPKIGEGA HAKVYEGKYK NQTVAIKIVH RGETPEEIAK RDSRFLREVE MLSRVQHKNL VKFIGACKEP VMVIVTELLQ
101: GGTLRKYLLN LRPACLETRV AIGFALDIAR GMECLHSHGI IHRDLKPENL LLTADHKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRLGE
201: KKHYNHKVDA YSFAIVLWEL LHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEELGDIVT SCWNEDPNAR PNFTHIIELL LNYLSKVGSP ISAIPQRILA
301: SKNTLLPPDS PGTSSLMAKL DECGETPKAK SEDKRKGLFF CFNQCY

Arabidopsis Description

At5g50180 [Source:UniProtKB/TrEMBL;Acc:Q9FGS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.