Factsheet for Solyc12g016100.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g009350.1.1	Tomato	cytosol	98.08	98.08
Solyc12g015980.1.1	Tomato	cytosol	95.77	95.77
Solyc12g016140.1.1	Tomato	cytosol	83.85	94.37
Solyc12g016060.1.1	Tomato	cytosol	68.46	92.71
PGSC0003DMT400007574	Potato	cytosol	78.85	65.92
PGSC0003DMT400007577	Potato	cytosol	87.31	61.19
Solyc12g009340.1.1	Tomato	cytosol	84.62	55.0
Solyc07g042680.2.1	Tomato	cytosol	77.31	48.79
Solyc07g042890.2.1	Tomato	cytosol	76.92	48.54
GSMUA_Achr1P23740_001	Banana	cytosol	66.54	48.06
VIT_11s0065g00140.t01	Wine grape	cytosol	75.38	47.8
KRH41382	Soybean	nucleus	73.08	45.67
AT2G24360.1	Thale cress	cytosol	71.54	45.26
KRH60100	Soybean	cytosol	72.31	45.19
Bra007860.1-P	Field mustard	cytosol, plastid	70.0	44.5
EES12824	Sorghum	cytosol	70.77	44.44
Zm00001d026267_P002	Maize	cytosol	70.77	44.34
GSMUA_Achr10P...	Banana	cytosol	70.0	44.28
CDY36453	Canola	cytosol	69.62	44.25
CDY23284	Canola	cytosol	69.62	44.25
CDY13414	Canola	cytosol	69.62	44.25
CDX72296	Canola	cytosol	69.62	44.25
Bra024020.1-P	Field mustard	cytosol	69.62	44.25
Zm00001d002371_P001	Maize	cytosol	70.38	44.1
Bra010247.1-P	Field mustard	cytosol	69.23	44.01
GSMUA_Achr7P15770_001	Banana	cytosol	70.38	43.88
CDY28247	Canola	cytosol	69.23	43.58
Bra011250.1-P	Field mustard	cytosol	69.23	43.58
Bra007859.1-P	Field mustard	cytosol	67.69	43.35
CDX68725	Canola	cytosol	68.85	43.34
AT4G31170.5	Thale cress	cytosol	68.46	43.2
CDY20306	Canola	cytosol	68.08	43.17
Os08t0224100-01	Rice	cytosol	69.23	43.17
CDY55245	Canola	cytosol	67.69	43.14
Os04t0608900-01	Rice	cytosol, plasma membrane	70.0	43.13
GSMUA_Achr6P03680_001	Banana	cytosol	69.23	43.06
HORVU7Hr1G068410.1	Barley	cytosol	68.08	42.55
TraesCS7D01G289500.1	Wheat	cytosol	67.69	42.31
TraesCS7B01G182600.1	Wheat	cytosol	67.69	42.31
TraesCS7A01G292800.1	Wheat	cytosol	67.69	42.31
CDY55246	Canola	plasma membrane, vacuole	70.38	41.88
GSMUA_Achr7P04900_001	Banana	cytosol	66.92	41.83
EES06353	Sorghum	cytosol	67.31	41.47
Zm00001d024338_P006	Maize	cytosol	67.31	41.37
Os02t0174200-01	Rice	plasma membrane	66.92	41.33
TraesCS6A01G155200.2	Wheat	cytosol	65.77	40.91
Zm00001d049361_P004	Maize	cytosol	66.54	40.9
EES13540	Sorghum	cytosol	65.38	40.77
TraesCS6D01G145100.2	Wheat	cytosol	65.38	40.67
HORVU6Hr1G031440.1	Barley	cytosol	65.77	40.62
HORVU7Hr1G109640.1	Barley	cytosol	66.15	40.47
GSMUA_Achr4P20740_001	Banana	cytosol	59.23	40.31
TraesCS7D01G474700.1	Wheat	cytosol	65.77	40.24
Os06t0663400-01	Rice	cytosol, plasma membrane	66.15	40.19
TraesCS6B01G183300.1	Wheat	cytosol	65.77	40.14
TraesCS7A01G488200.1	Wheat	cytosol	65.77	40.05
TraesCS7B01G391300.1	Wheat	cytosol	65.38	40.0
CDY46142	Canola	mitochondrion	67.69	38.43
Zm00001d053770_P001	Maize	cytosol	49.23	36.26
KXG24726	Sorghum	vacuole	64.23	31.63
Solyc03g114310.2.1	Tomato	cytosol	35.38	26.21
Solyc09g018060.2.1	Tomato	cytosol	30.77	25.81
Solyc02g093410.2.1	Tomato	cytosol	30.0	22.1
Solyc04g014690.2.1	Tomato	mitochondrion	31.15	21.49
CDY34777	Canola	cytosol	67.69	21.46
Solyc11g012050.1.1	Tomato	mitochondrion	30.77	21.39
Bra032102.1-P	Field mustard	cytosol	67.31	20.98
Solyc02g085620.2.1	Tomato	cytosol	28.46	19.95
Solyc03g006400.2.1	Tomato	cytosol	36.54	19.79
Solyc02g078140.2.1	Tomato	cytosol	37.31	19.25
Solyc01g111880.2.1	Tomato	cytosol	37.69	17.41
Solyc10g055720.1.1	Tomato	cytosol	37.69	17.41
Solyc04g071120.2.1	Tomato	cytosol	35.77	17.19
Solyc02g083290.2.1	Tomato	cytosol	36.92	17.08
Solyc12g094410.1.1	Tomato	cytosol	36.54	16.7

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	UniProt:K4DD44	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF601	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc12g016100.1	EnsemblPlants:Solyc12g016100.1.1	UniParc:UPI000276AB06	SEG:seg

Description

No Description!

Coordinates

chr12:-:6121808..6122590

Molecular Weight (calculated)

28312.0 Da

IEP (calculated)

7.691

GRAVY (calculated)

-0.120

Length

260 amino acids

Sequence
(BLAST)

001: MSIQGYGMNN ASGSGAMAVD NSSVGSNGSH TDILNQQGNH IHNNYSVAAS VVGGRVSRLS DDALAQALVD PQFPTTGLVI CDEWTIDLSR LTIGQAFAQG
101: SFGKLYNGTY SGEDVAIKLL ERPEHALEKA HFIEQQFQHE VRMLANLKHP NVIRFVGACR KTMVLCIVTE YASGGSVRQF LAKRQNRAVP LKLAVKQALD
201: VAKGMEYVHG LNLIHRDLKS DNLLIAADKS IKIADFGIAR IEVLTEGMTP ETGTYRWMAP

Best Arabidopsis Sequence Match ( AT2G24360.1 )
(BLAST)

001: MLEGAKFNVL AVGNHHNNDN NYYAFTQEFY QKLNEGSNMS MESMQTSNAG GSVSMSVDNS SVGSSDALIG HPGLKPVRHY SLSVGQSVFR PGRVTHALND
101: DALAQALMDT RYPTEGLTNY DEWTIDLRKL NMGPAFAQGA FGKLYKGTYN GEDVAIKILE RPENSPEKAQ FMEQQFQQEV SMLANLKHPN IVRFIGACRK
201: PMVWCIVTEY AKGGSVRQFL TRRQNRAVPL KLAVKQALDV ARGMAYVHGR NFIHRDLKSD NLLISADKSI KIADFGVARI EVQTEGMTPE TGTYRWMAPE
301: MIQHRAYNQK VDVYSFGIVL WELITGLLPF QNMTAVQAAF AVVNRGVRPT VPNDCLPVLS DIMTRCWDAN PEVRPCFVEV VKLLEAAETE IMTTARKARF
401: RCCLSQPMTI D

Arabidopsis Description

STY13Serine/threonine-protein kinase STY13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.