Factsheet for GSMUA_Achr6P03680_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	89.47	91.0
GSMUA_Achr7P15770_001	Banana	cytosol	89.95	90.17
GSMUA_Achr1P23740_001	Banana	cytosol	69.14	80.28
VIT_04s0008g03020.t01	Wine grape	cytosol	77.51	77.7
VIT_11s0065g00140.t01	Wine grape	cytosol	75.84	77.32
GSMUA_Achr7P04900_001	Banana	cytosol	76.79	77.16
KRH41382	Soybean	nucleus	76.56	76.92
KRH60100	Soybean	cytosol	76.56	76.92
GSMUA_Achr4P20740_001	Banana	cytosol	70.1	76.7
Solyc07g042680.2.1	Tomato	cytosol	75.36	76.46
AT2G24360.1	Thale cress	cytosol	74.4	75.67
Solyc07g042890.2.1	Tomato	cytosol	74.4	75.49
Bra007860.1-P	Field mustard	cytosol, plastid	73.21	74.82
CDY23284	Canola	cytosol	72.97	74.57
CDY36453	Canola	cytosol	72.97	74.57
CDY13414	Canola	cytosol	72.73	74.33
CDX72296	Canola	cytosol	72.73	74.33
Bra010247.1-P	Field mustard	cytosol	72.73	74.33
Bra024020.1-P	Field mustard	cytosol	72.49	74.08
Bra007859.1-P	Field mustard	cytosol	71.77	73.89
CDY55245	Canola	cytosol	71.77	73.53
CDY28247	Canola	cytosol	72.25	73.12
Bra011250.1-P	Field mustard	cytosol	72.25	73.12
AT4G31170.5	Thale cress	cytosol	72.01	73.06
CDX68725	Canola	cytosol	71.77	72.64
Solyc12g016060.1.1	Tomato	cytosol	33.25	72.4
Solyc12g009340.1.1	Tomato	cytosol	68.9	72.0
PGSC0003DMT400007578	Potato	cytosol	68.66	71.75
CDY20306	Canola	cytosol	70.33	71.71
PGSC0003DMT400007577	Potato	cytosol	62.68	70.62
CDY55246	Canola	plasma membrane, vacuole	73.21	70.02
Solyc12g016140.1.1	Tomato	cytosol	38.28	69.26
Solyc12g016100.1.1	Tomato	cytosol	43.06	69.23
Solyc12g009350.1.1	Tomato	cytosol	43.06	69.23
Solyc12g015980.1.1	Tomato	cytosol	41.87	67.31
CDY46142	Canola	mitochondrion	69.38	63.32
PGSC0003DMT400007574	Potato	cytosol	46.65	62.7
GSMUA_AchrUn_...	Banana	cytosol	32.54	39.77
GSMUA_Achr1P09680_001	Banana	cytosol	32.54	39.77
GSMUA_Achr8P18690_001	Banana	cytosol	32.3	38.35
GSMUA_Achr1P26270_001	Banana	cytosol	20.81	38.33
GSMUA_Achr8P34140_001	Banana	extracellular, plasma membrane	24.88	37.55
GSMUA_Achr2P22880_001	Banana	cytosol	31.82	37.36
GSMUA_AchrUn_...	Banana	cytosol	13.88	37.18
CDY34777	Canola	cytosol	71.77	36.59
GSMUA_Achr9P01860_001	Banana	cytosol	30.62	36.47
GSMUA_Achr6P06670_001	Banana	cytosol	30.14	35.8
Bra032102.1-P	Field mustard	cytosol	68.9	34.53
GSMUA_Achr10P...	Banana	cytosol	30.86	33.77
GSMUA_AchrUn_...	Banana	cytosol	16.51	32.39
GSMUA_Achr4P18600_001	Banana	cytosol	28.47	31.48
GSMUA_Achr9P05820_001	Banana	cytosol	35.17	29.76
GSMUA_Achr6P25310_001	Banana	cytosol	33.97	27.2
GSMUA_Achr9P08830_001	Banana	cytosol	33.97	27.0
GSMUA_Achr4P04890_001	Banana	cytosol	34.69	26.08
GSMUA_Achr10P...	Banana	cytosol	34.45	25.67
GSMUA_Achr2P15610_001	Banana	cytosol	35.17	25.04
GSMUA_Achr4P30980_001	Banana	cytosol	34.45	24.96
GSMUA_Achr7P03190_001	Banana	cytosol	33.73	23.98
GSMUA_Achr6P26170_001	Banana	cytosol	35.17	19.71
GSMUA_Achr7P03940_001	Banana	cytosol	19.62	18.39
GSMUA_Achr1P14940_001	Banana	cytosol	19.14	17.58
GSMUA_Achr1P26280_001	Banana	cytosol	3.83	6.75
GSMUA_Achr8P34130_001	Banana	cytosol	4.07	6.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G03680_001
EnsemblPlants:GSMUA_Achr6P03680_001	EnsemblPlants:GSMUA_Achr6T03680_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T3W6	PFAM:PF07714
PIRSF:PIRSF000615	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF618
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002968E73
SEG:seg	:	:	:	:	:

Description

serine/threonine-protein kinase HT1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G03680_001]

Coordinates

chr6:-:2515112..2521283

Molecular Weight (calculated)

46227.9 Da

IEP (calculated)

7.582

GRAVY (calculated)

-0.174

Length

418 amino acids

Sequence
(BLAST)

001: MADGSKFAGF MVGGGGGGGV NGVGNGFYDM GFYRKLDEGS NMSIDSVGSL QTSTGGGSAP MSVENSSVGS NSRTGILRHT ALRLFPGANF SVGHSVLRHG
101: RVSHAMNEDA LAQALMDPRY TTESLENYDE WTIDLRKLNM GVAFAQGAFG KLYRGTYDGE DVAIKLLERP ENDPERVQLM EQQFGQEVMM LANLKHLNIV
201: RFIGACRKPM VWCIVTEYAK GGSVRQFLMK RHNRSVPLKL AVKQALDIAR GMEYVHGLGF IHRDLKSDNL LISADKSIKI ADFGVARIEV KTEGMTPETG
301: TYRWMAPEMI QHRPYNQKVD VYSFGIVLWE LITGMLPFQN MTAVQAAFAV VNRGVRPIIP QDCLPALGEI MTRCWDANPD VRPSFTEIIS LLEGAQEDIV
401: HTVRKARFRC CIQPMTTD

Best Arabidopsis Sequence Match ( AT2G24360.1 )
(BLAST)

001: MLEGAKFNVL AVGNHHNNDN NYYAFTQEFY QKLNEGSNMS MESMQTSNAG GSVSMSVDNS SVGSSDALIG HPGLKPVRHY SLSVGQSVFR PGRVTHALND
101: DALAQALMDT RYPTEGLTNY DEWTIDLRKL NMGPAFAQGA FGKLYKGTYN GEDVAIKILE RPENSPEKAQ FMEQQFQQEV SMLANLKHPN IVRFIGACRK
201: PMVWCIVTEY AKGGSVRQFL TRRQNRAVPL KLAVKQALDV ARGMAYVHGR NFIHRDLKSD NLLISADKSI KIADFGVARI EVQTEGMTPE TGTYRWMAPE
301: MIQHRAYNQK VDVYSFGIVL WELITGLLPF QNMTAVQAAF AVVNRGVRPT VPNDCLPVLS DIMTRCWDAN PEVRPCFVEV VKLLEAAETE IMTTARKARF
401: RCCLSQPMTI D

Arabidopsis Description

STY13Serine/threonine-protein kinase STY13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ31]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.