Factsheet for GSMUA_Achr10P27690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr2P17520_001
GSMUA_Achr4P21110_001
GSMUA_Achr4P28510_001
GSMUA_Achr6P08260_001
GSMUA_Achr6P16290_001
GSMUA_Achr7P16760_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	GSMUA_Achr6P08260_001	AT3G11590.1	21798944
AT5G58950.1	GSMUA_Achr6P16290_001	AT3G11590.1	21798944
AT5G58950.1	GSMUA_Achr2P17520_001	AT3G22960.1	21798944
AT5G58950.1	GSMUA_Achr4P21110_001	AT3G22960.1	21798944
AT5G58950.1	GSMUA_Achr4P28510_001	AT3G22960.1	21798944
AT5G58950.1	GSMUA_Achr7P16760_001	AT3G22960.1	21798944
AT5G58950.1	GSMUA_Achr11P...	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30980_001	Banana	cytosol	72.55	70.54
GSMUA_Achr2P15610_001	Banana	cytosol	72.55	69.34
GSMUA_Achr9P05820_001	Banana	cytosol	56.15	63.77
KRH10889	Soybean	cytosol	49.55	60.17
KRH21427	Soybean	cytosol	49.38	59.83
KRH50054	Soybean	cytosol, plastid	51.69	58.23
KRH20446	Soybean	cytosol, plastid	51.16	58.1
PGSC0003DMT400033356	Potato	cytosol, plastid	50.09	58.06
Solyc03g006400.2.1	Tomato	cytosol	49.38	57.71
PGSC0003DMT400076363	Potato	cytosol	50.98	56.75
Solyc02g078140.2.1	Tomato	cytosol	50.98	56.75
OQU87530	Sorghum	cytosol	37.43	55.41
CDX71145	Canola	cytosol, plastid	45.28	53.59
CDY32673	Canola	cytosol	45.63	53.33
CDX88676	Canola	cytosol, plastid	45.28	53.14
CDX80321	Canola	cytosol	44.92	53.05
CDY32674	Canola	cytosol, plastid	45.1	51.84
Bra006738.1-P	Field mustard	cytosol, plastid	46.17	51.49
CDY69707	Canola	cytosol, plastid	45.28	51.42
Bra002606.1-P	Field mustard	cytosol, plastid	45.28	51.42
CDY02848	Canola	cytosol	43.85	51.14
Bra020343.1-P	Field mustard	cytosol, plastid	45.99	50.39
KRH13899	Soybean	cytosol	29.06	49.7
KRH13893	Soybean	cytosol	29.06	49.7
KRH43461	Soybean	cytosol	28.88	49.39
AT5G58950.1	Thale cress	plastid	45.28	48.38
Os01t0201200-01	Rice	nucleus	47.59	47.42
KRH27396	Soybean	cytosol	22.82	47.23
CDX99086	Canola	cytosol, plastid	37.43	47.19
GSMUA_Achr8P18690_001	Banana	cytosol	29.59	47.16
GSMUA_Achr2P22880_001	Banana	cytosol	29.23	46.07
KXG31606	Sorghum	cytosol	46.88	45.98
CDX86103	Canola	cytosol	38.15	45.92
Zm00001d008875_P001	Maize	cytosol	45.81	45.81
Zm00001d032310_P001	Maize	cytosol	48.48	45.48
Bra018183.1-P	Field mustard	cytosol	39.22	45.08
GSMUA_AchrUn_...	Banana	cytosol	27.45	45.03
Zm00001d039427_P002	Maize	cytosol	45.81	44.77
HORVU3Hr1G071240.2	Barley	cytosol	47.59	44.35
TraesCS3B01G307700.2	Wheat	cytosol	47.42	44.26
TraesCS3A01G274000.1	Wheat	cytosol	47.42	44.26
GSMUA_Achr1P09680_001	Banana	cytosol	26.92	44.15
TraesCS3D01G140700.1	Wheat	cytosol	43.67	43.75
TraesCS3D01G273200.1	Wheat	cytosol	46.7	43.59
TraesCS3B01G158300.1	Wheat	nucleus	43.32	43.39
OQU80422	Sorghum	cytosol	48.13	43.34
TraesCS1B01G351900.1	Wheat	nucleus	45.99	43.14
AT3G46930.2	Thale cress	cytosol	39.57	43.11
TraesCS3A01G313600.1	Wheat	cytosol	42.96	43.04
Os01t0747400-01	Rice	cytosol	48.84	43.01
TraesCS1D01G341600.1	Wheat	nucleus	45.81	42.98
HORVU1Hr1G076110.1	Barley	nucleus	45.99	42.93
TraesCS1A01G339600.1	Wheat	cytosol	45.81	42.83
Os05t0519200-02	Rice	cytosol	45.99	42.72
KXG22364	Sorghum	cytosol	45.81	42.27
HORVU3Hr1G026870.1	Barley	cytosol	42.96	41.84
Zm00001d000396_P001	Maize	cytosol	43.67	41.67
GSMUA_AchrUn_...	Banana	cytosol	11.59	41.67
GSMUA_Achr6P26170_001	Banana	cytosol	55.26	41.55
GSMUA_Achr1P23740_001	Banana	cytosol	24.42	38.06
Zm00001d038809_P008	Maize	cytosol	44.92	37.95
GSMUA_Achr8P34140_001	Banana	extracellular, plasma membrane	18.54	37.55
GSMUA_Achr6P06670_001	Banana	cytosol	22.82	36.36
GSMUA_Achr9P01860_001	Banana	cytosol	22.46	35.9
GSMUA_Achr10P...	Banana	cytosol	26.2	35.77
GSMUA_Achr7P04900_001	Banana	cytosol	25.85	34.86
GSMUA_Achr7P15770_001	Banana	cytosol	25.85	34.77
GSMUA_Achr6P03680_001	Banana	cytosol	25.67	34.45
GSMUA_Achr4P20740_001	Banana	cytosol	23.35	34.29
GSMUA_Achr1P26270_001	Banana	cytosol	13.01	32.16
GSMUA_AchrUn_...	Banana	cytosol	11.76	30.99
GSMUA_Achr4P18600_001	Banana	cytosol	20.86	30.95
GSMUA_Achr10P...	Banana	cytosol	20.86	30.63
GSMUA_Achr9P08830_001	Banana	cytosol	24.96	26.62
GSMUA_Achr6P25310_001	Banana	cytosol	23.89	25.67
GSMUA_Achr4P04890_001	Banana	cytosol	24.06	24.28
GSMUA_Achr7P03190_001	Banana	cytosol	22.99	21.94
GSMUA_Achr7P03940_001	Banana	cytosol	15.33	19.28
GSMUA_Achr1P14940_001	Banana	cytosol	14.79	18.24
GSMUA_Achr1P26280_001	Banana	cytosol	5.17	12.24
GSMUA_Achr8P34130_001	Banana	cytosol	5.53	12.2

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G27690_001
EnsemblPlants:GSMUA_Achr10P27690_001	EnsemblPlants:GSMUA_Achr10T27690_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0RLZ3	PFAM:PF07714
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296ADD5	SEG:seg	:

Description

Putative Serine/threonine-protein kinase HT1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G27690_001]

Coordinates

chr10:-:30750087..30753723

Molecular Weight (calculated)

62816.5 Da

IEP (calculated)

9.827

GRAVY (calculated)

-0.445

Length

561 amino acids

Sequence
(BLAST)

001: MEEEGCSWVR RAMFSHTVCH RLDYANLHSI LLPIKSESNP RLKPKRTAEA SQLSSISLPV DRNAGPETAS SISHSASLSS SQLLLRDRRR GSKTNKSSSE
101: IPISYLRSEQ EPKSGASNST VVVSSSTQKA NKHRKPKTMG SLEISSFSIH PDQESKRSAS PLPTTILSDV FKEARANEKR FATPPPRRKG SEKSTSSLHQ
201: FSLMKATGKH KSLKEASWAR YFEQGGGKVI SLGTSDDWMV DPSQLYVGLR FASGAHSKLY HGIYKDQPVA VKIIRQPDDD ENGLMAARLE KQFTREVTLL
301: SHLYHRNVIK LVAAWQKPPV FCVITEYLSG GSLRAFLHKL KQKSLPLQKL IAIALDVARG MEYIHSQGVI HRDLKPENIL FDQDLCVKIA DFGIACEEAH
401: CDTLTEDPGT FRWMAPEMIK HKPYGRKVDV YSFGLVLWEM ATGRIPYEEM MPVQAAFAVV DKNSRPVVPP ECPTALRTLI EQCWALHPDK RPDFWQIVKV
501: LEQFESALAQ DGTLDTVANV NCQDHKKRLL RWIHKLKPTH ADGGSAPPPP LKLSTSMTKL L

Best Arabidopsis Sequence Match ( AT5G58950.1 )
(BLAST)

001: MDEEATSWIR RAKFSQTVSY RLNSSKLASL PFMINQDKFS GLKAIPQRSS SSSSASSSDP KLVSSNSQTT GDTSSLEAAD VYVVDSEIQT NPVTHKQRSV
101: SPSPQMAVPD VFKEARSERK RFSTPHPRRV ESEKGMKPKL SHKNSFDKRS FNLRSPSGPI RDLGTLRIQE RVKSKKDTGW SKLFDNTGRR VSAVEASEEF
201: RVDMSKLFFG LKFAHGLYSR LYHGKYEDKA VAVKLITVPD DDDNGCLGAR LEKQFTKEVT LLSRLTHPNV IKFVGAYKDP PVYCVLTQYL PEGSLRSFLH
301: KPENRSLPLK KLIEFAIDIA RGMEYIHSRR IIHRDLKPEN VLIDEEFHLK IADFGIACEE EYCDMLADDP GTYRWMAPEM IKRKPHGRKA DVYSFGLVLW
401: EMVAGAIPYE DMNPIQAAFA VVHKNIRPAI PGDCPVAMKA LIEQCWSVAP DKRPEFWQIV KVLEQFAISL EREGNLNLSS SKICKDPRKG LKHWIQKLGP
501: VHAGGGGGSS SSGLGGSALP KPKFA

Arabidopsis Description

At5g58950 [Source:UniProtKB/TrEMBL;Acc:Q9FIL6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.