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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001412.1-P
Bra001896.1-P
Bra010714.1-P
Bra023780.1-P
Bra033597.1-P
Bra034827.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G58950.1 Bra001412.1-P AT3G11590.1 21798944
AT5G58950.1 Bra034827.1-P AT3G11590.1 21798944
AT5G58950.1 Bra001896.1-P AT3G22960.1 21798944
AT5G58950.1 Bra023780.1-P AT3G22960.1 21798944
AT5G58950.1 Bra010714.1-P AT4G39050.1 21798944
AT5G58950.1 Bra033597.1-P AT4G39050.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32674 Canola cytosol, plastid 94.92 99.59
Bra006738.1-P Field mustard cytosol, plastid 85.55 87.08
AT5G58950.1 Thale cress plastid 85.35 83.24
Bra002606.1-P Field mustard cytosol, plastid 79.69 82.59
Solyc02g078140.2.1 Tomato cytosol 58.2 59.13
PGSC0003DMT400076363 Potato cytosol 58.01 58.93
PGSC0003DMT400033356 Potato cytosol, plastid 55.47 58.68
Solyc03g006400.2.1 Tomato cytosol 54.69 58.33
Bra018183.1-P Field mustard cytosol 53.32 55.94
KRH43461 Soybean cytosol 32.81 51.22
KRH13893 Soybean cytosol 32.81 51.22
KRH13899 Soybean cytosol 32.81 51.22
GSMUA_Achr9P05820_001 Banana cytosol 48.44 50.2
KRH27396 Soybean cytosol 25.98 49.08
OQU87530 Sorghum cytosol 34.38 46.44
GSMUA_Achr10P... Banana cytosol 50.39 45.99
GSMUA_Achr2P15610_001 Banana cytosol 52.15 45.49
GSMUA_Achr4P30980_001 Banana cytosol 51.17 45.41
Os01t0201200-01 Rice nucleus 45.31 41.21
TraesCS3B01G158300.1 Wheat nucleus 44.92 41.07
KXG31606 Sorghum cytosol 45.31 40.56
TraesCS3D01G140700.1 Wheat cytosol 44.34 40.54
TraesCS3A01G313600.1 Wheat cytosol 43.95 40.18
TraesCS3A01G274000.1 Wheat cytosol 46.68 39.77
TraesCS3D01G273200.1 Wheat cytosol 46.68 39.77
TraesCS3B01G307700.2 Wheat cytosol 46.68 39.77
Zm00001d008875_P001 Maize cytosol 43.36 39.57
Zm00001d039427_P002 Maize cytosol 44.14 39.37
Zm00001d032310_P001 Maize cytosol 45.7 39.13
HORVU3Hr1G071240.2 Barley cytosol 45.9 39.04
KXG22364 Sorghum cytosol 46.09 38.82
HORVU3Hr1G026870.1 Barley cytosol 43.55 38.72
Bra027048.1-P Field mustard mitochondrion, plastid 29.3 38.66
Bra036661.1-P Field mustard mitochondrion 29.3 38.46
TraesCS1B01G351900.1 Wheat nucleus 44.34 37.96
OQU80422 Sorghum cytosol 46.09 37.88
TraesCS1A01G339600.1 Wheat cytosol 44.34 37.83
TraesCS1D01G341600.1 Wheat nucleus 44.14 37.79
Os05t0519200-02 Rice cytosol 44.53 37.75
HORVU1Hr1G076110.1 Barley nucleus 43.95 37.44
Zm00001d000396_P001 Maize cytosol 42.58 37.07
Os01t0747400-01 Rice cytosol 45.7 36.73
Bra024020.1-P Field mustard cytosol 28.91 36.19
Bra007859.1-P Field mustard cytosol 28.32 35.71
Bra007860.1-P Field mustard cytosol, plastid 28.52 35.7
Bra010247.1-P Field mustard cytosol 28.52 35.7
Bra011250.1-P Field mustard cytosol 28.32 35.11
Bra028913.1-P Field mustard cytosol 22.46 34.53
Zm00001d038809_P008 Maize cytosol 44.73 34.49
Bra000612.1-P Field mustard cytosol 23.24 33.9
GSMUA_Achr6P26170_001 Banana cytosol 48.83 33.51
Bra025563.1-P Field mustard cytosol 22.27 32.66
Bra025286.1-P Field mustard cytosol 22.07 31.74
Bra012094.1-P Field mustard cytosol, nucleus, plastid 21.09 26.93
Bra037152.1-P Field mustard cytosol 20.7 26.77
Bra015215.1-P Field mustard cytosol 26.95 25.79
Bra011897.1-P Field mustard cytosol 27.93 25.35
Bra010744.1-P Field mustard cytosol 28.12 25.13
Bra024497.1-P Field mustard cytosol 26.37 24.68
Bra010516.1-P Field mustard cytosol 27.34 24.6
Bra002078.1-P Field mustard cytosol 26.95 24.34
Bra037258.1-P Field mustard cytosol 26.76 23.78
Bra032102.1-P Field mustard cytosol 27.34 16.79
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.30Gene3D:3.30.200.20EnsemblPlantsGene:Bra020343EnsemblPlants:Bra020343.1EnsemblPlants:Bra020343.1-P
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:Kinase-like_dom_sfUniProt:M4DV00PFAM:PF07714
PIRSF:PIRSF000615PRINTS:PR00109ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR44581PANTHER:PTHR44581:SF2
InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI0002542FED
SEG:seg:::::
Description
AT5G58950 (E=7e-228) | protein kinase family protein
Coordinates
chrA02:+:6319477..6321162
Molecular Weight (calculated)
57740.3 Da
IEP (calculated)
9.934
GRAVY (calculated)
-0.569
Length
512 amino acids
Sequence
(BLAST)
001: MDEEASSWIR RAKFSQTVSY RLNSSKLASF PVKLNQEKKL PALKPRPDTS SSSSSTSTQA DVYVVDSQVQ RNPVTNKQRS VSPSPQMALP DVFKEARSER
101: QRFSTPHPRR MDSEKGMKPK LSHKNSFDKR RSFNLRSPSV PIRDLSTLRI QERVKSMKDT GWSKIFDNAG RKVSADDAAE EFRIDTSKLF LGLRFAHGLY
201: SKLYHGKYED KAVAVKLITV PEDDENGCLG ARLEKQFTKE VTLLSRLSHP NVIKFVGAYK DPPSYCVLTE YLPEGSLRSY LHKPENRTLS LKKLIEFALD
301: IAKGMEYIHS RRIIHRDLKP ENVLIDEDFQ LKIADFGIAC EEEYCDMLAD DPGTYRWMAP EMIKRKPHGR KADVYSFGLV LWEMVAGAIP YEDMNPIQAA
401: FAVVHKNIRP AIPEDCPAVM KALIEQCWSV APDKRPEFWQ IVKVLEQFRV SLEREGSLNL TSNKICKDPR KSLKHWIKKL GPQGGGTAGG GAGGSSSSGG
501: LGRSAMPNPK FA
Best Arabidopsis Sequence Match ( AT5G58950.1 )
(BLAST)
001: MDEEATSWIR RAKFSQTVSY RLNSSKLASL PFMINQDKFS GLKAIPQRSS SSSSASSSDP KLVSSNSQTT GDTSSLEAAD VYVVDSEIQT NPVTHKQRSV
101: SPSPQMAVPD VFKEARSERK RFSTPHPRRV ESEKGMKPKL SHKNSFDKRS FNLRSPSGPI RDLGTLRIQE RVKSKKDTGW SKLFDNTGRR VSAVEASEEF
201: RVDMSKLFFG LKFAHGLYSR LYHGKYEDKA VAVKLITVPD DDDNGCLGAR LEKQFTKEVT LLSRLTHPNV IKFVGAYKDP PVYCVLTQYL PEGSLRSFLH
301: KPENRSLPLK KLIEFAIDIA RGMEYIHSRR IIHRDLKPEN VLIDEEFHLK IADFGIACEE EYCDMLADDP GTYRWMAPEM IKRKPHGRKA DVYSFGLVLW
401: EMVAGAIPYE DMNPIQAAFA VVHKNIRPAI PGDCPVAMKA LIEQCWSVAP DKRPEFWQIV KVLEQFAISL EREGNLNLSS SKICKDPRKG LKHWIQKLGP
501: VHAGGGGGSS SSGLGGSALP KPKFA
Arabidopsis Description
At5g58950 [Source:UniProtKB/TrEMBL;Acc:Q9FIL6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.