Factsheet for Bra034827.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000304.1-P
Bra005847.1-P
Bra007261.1-P
Bra009093.1-P
Bra010996.1-P
Bra011368.1-P
Bra012474.1-P
Bra012880.1-P
Bra014221.1-P
Bra014370.1-P
Bra014678.1-P
Bra017007.1-P
Bra018304.1-P
Bra020748.1-P
Bra021651.1-P
Bra022807.1-P
Bra024741.1-P
Bra030909.1-P
Bra032645.1-P
Bra033247.1-P
Bra033505.1-P
Bra033870.1-P
Bra035030.1-P
Bra036850.1-P
Bra037960.1-P
Bra039652.1-P
Bra039992.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11590.1	Bra032645.1-P	AT1G01630.1	21798944
AT3G11590.1	Bra033247.1-P	AT1G01630.1	21798944
AT3G11590.1	Bra010996.1-P	AT1G25490.1	21798944
AT3G11590.1	Bra012474.1-P	AT1G25490.1	21798944
AT3G11590.1	Bra024741.1-P	AT1G25490.1	21798944
AT3G11590.1	Bra035030.1-P	AT1G25490.1	21798944
AT3G11590.1	Bra039992.1-P	AT1G25490.1	21798944
AT3G11590.1	Bra033870.1-P	AT1G31870.1	21798944
AT3G11590.1	Bra014221.1-P	AT1G49850.1	21798944
AT3G11590.1	Bra039652.1-P	AT1G49850.1	21798944
AT3G11590.1	Bra014370.1-P	AT1G54060.1	21798944
AT3G11590.1	Bra030909.1-P	AT1G54060.1	21798944
AT3G11590.1	Bra037960.1-P	AT1G54060.1	21798944
AT3G11590.1	Bra017007.1-P	AT2G19650.1	21798944
AT3G11590.1	Bra018304.1-P	AT2G30580.1	21798944
AT3G11590.1	Bra021651.1-P	AT2G30580.1	21798944
AT3G11590.1	Bra022807.1-P	AT2G30580.1	21798944
AT3G11590.1	Bra000304.1-P	AT2G43370.1	21798944
AT3G11590.1	Bra020748.1-P	AT3G06430.1	21798944
AT3G11590.1	Bra012880.1-P	AT3G50910.1	21798944
AT3G11590.1	Bra036850.1-P	AT3G50910.1	21798944
AT3G11590.1	Bra007261.1-P	AT3G56680.1	21798944
AT3G11590.1	Bra014678.1-P	AT3G56680.1	21798944
AT3G11590.1	Bra033505.1-P	AT4G15730.1	21798944
AT3G11590.1	Bra011368.1-P	AT4G32660.1	21798944
AT3G11590.1	Bra005847.1-P	AT5G05190.1	21798944
AT3G11590.1	Bra009093.1-P	AT5G05190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08511	Canola	plastid	99.67	99.51
AT3G11590.1	Thale cress	plastid	89.41	88.26
Bra001412.1-P	Field mustard	nucleus	45.11	79.83
VIT_08s0007g02790.t01	Wine grape	plastid	62.22	58.05
KRG96225	Soybean	nucleus	61.73	57.86
KRH67971	Soybean	plastid	61.56	57.27
PGSC0003DMT400072353	Potato	plastid	56.51	52.98
Solyc10g083190.1.1	Tomato	plastid	55.7	51.74
Bra006620.1-P	Field mustard	nucleus	27.69	37.69
Bra002404.1-P	Field mustard	nucleus	27.69	35.12
GSMUA_Achr6P16290_001	Banana	nucleus	34.36	34.2
GSMUA_Achr6P08260_001	Banana	nucleus	28.5	30.54
EES11990	Sorghum	nucleus	26.22	28.35
HORVU2Hr1G069400.8	Barley	nucleus	23.29	28.09
Zm00001d003996_P001	Maize	nucleus	25.9	27.94
Os04t0382800-00	Rice	nucleus	25.9	27.85
TraesCS2B01G299400.1	Wheat	nucleus, plastid	25.24	27.83
Zm00001d025208_P002	Maize	nucleus	26.55	27.82
TraesCS2A01G282200.1	Wheat	nucleus	25.41	27.56
TraesCS2D01G281000.1	Wheat	nucleus, plastid	25.41	27.56
Os02t0506100-00	Rice	plastid	19.54	27.52
TraesCS7B01G035800.1	Wheat	nucleus	25.41	26.99
TraesCS7D01G134000.1	Wheat	nucleus	25.41	26.94
TraesCS7A01G134600.1	Wheat	nucleus	25.08	26.6
KXG30263	Sorghum	mitochondrion	24.59	24.28
Bra004552.1-P	Field mustard	nucleus	15.64	23.3
Zm00001d000402_P001	Maize	mitochondrion	20.36	22.81
Bra018866.1-P	Field mustard	nucleus	23.78	21.69
Bra035788.1-P	Field mustard	mitochondrion	21.82	21.04
Bra025484.1-P	Field mustard	nucleus	20.03	20.67
Bra027683.1-P	Field mustard	nucleus	19.38	20.66

Protein Annotations

EnsemblPlants:Bra034827.1	EnsemblPlants:Bra034827.1-P	EnsemblPlantsGene:Bra034827	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF7
SEG:seg	UniParc:UPI0002547630	UniProt:M4F181	MapMan:35.1	:	:

Description

AT3G11590 (E=8e-252) | unknown protein

Coordinates

chrA05:-:21599338..21602239

Molecular Weight (calculated)

68911.4 Da

IEP (calculated)

9.876

GRAVY (calculated)

-0.911

Length

614 amino acids

Sequence
(BLAST)

001: MPRQNQTVEN LLLLGKIRKR GCSSPTSSTS SVLREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPAAS PGYALSQCGS KTGRGGAPAA PVSARKLAAT
101: LWEMNEMPSS PRGVEEVRKV RKERIAPLPP PPPRSRSVRS GSLPPHLSDP SHSPVSERME RSGTGSRQRR ASSTVQKLRL GDHNVVARDR ISNASFMDIE
201: TRSRGETPTG STTVGVKTRL KDCSNALTTS KELLKIINRM WGQEDRPSSS MSLVSALHSE LERARLQVNE VIREHRPENN DVTYLMKRFA EEKAAWKSHE
301: QEVVEAAIES VAGELEVERK LRRRFEGLNK KLGKELSDTK AALMKAVKEI ENEKRARVMV EKVCDELARD ISEDKAEVEE LKRESFKVKE EVEKEREMLQ
401: LADALREERV QMKLSEAKHQ LEEKNAAVDK LRNQLQTYLK AKRCKEKTLE PPQTEEYLNH HIGFGSYNIE DGEVEDENEE DSGGESDLHS IELNMENKSY
501: KWPYGEDNNR VGRKSTPSKS LSLQRSISDC VDWVVQSEKL QKSGDGGLDW GRSVEVEPKG YLDETQAYKP SKASSKDHLL SGPRLSNFRG GSVSKSRLSD
601: AAKSENQNAR KSRW

Best Arabidopsis Sequence Match ( AT3G11590.1 )
(BLAST)

001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW

Arabidopsis Description

At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.