Factsheet for Bra018304.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002404.1-P
Bra004527.1-P
Bra004582.1-P
Bra005852.1-P
Bra006620.1-P
Bra009112.1-P
Bra013746.1-P
Bra016980.1-P
Bra023148.1-P
Bra027585.1-P
Bra028759.1-P
Bra029810.1-P
Bra032712.1-P
Bra039275.1-P
Bra039276.1-P
Bra039871.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30580.1	Bra023148.1-P	AT1G30860.1	21798944
AT2G30580.1	Bra039871.1-P	AT1G30860.1	21798944
AT2G30580.1	Bra004582.1-P	AT2G40620.1	21798944
AT2G30580.1	Bra016980.1-P	AT2G40620.1	21798944
AT2G30580.1	Bra004527.1-P	AT2G46550.1	21798944
AT2G30580.1	Bra039275.1-P	AT2G46550.1	21798944
AT2G30580.1	Bra039276.1-P	AT2G46550.1	21798944
AT2G30580.1	Bra013746.1-P	AT3G09980.1	21798944
AT2G30580.1	Bra027585.1-P	AT3G09980.1	21798944
AT2G30580.1	Bra029810.1-P	AT3G09980.1	21798944
AT2G30580.1	Bra032712.1-P	AT4G13540.1	21798944
AT2G30580.1	Bra005852.1-P	AT5G05410.1	18552202
AT2G30580.1	Bra009112.1-P	AT5G05410.1	18552202
AT2G30580.1	Bra028759.1-P	AT5G05410.1	18552202
AT2G30580.1	Bra002404.1-P	AT5G22310.1	21798944
AT2G30580.1	Bra006620.1-P	AT5G22310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10748	Canola	nucleus	93.75	96.2
Bra022807.1-P	Field mustard	cytosol	15.28	94.29
AT2G30580.1	Thale cress	nucleus	80.32	82.62
Bra021651.1-P	Field mustard	nucleus	60.88	74.72
VIT_07s0141g00610.t01	Wine grape	nucleus	53.47	53.72
PGSC0003DMT400038984	Potato	nucleus	52.78	53.02
KRG95629	Soybean	nucleus	52.08	52.57
Solyc09g065990.2.1	Tomato	nucleus	51.62	51.86
KRH67309	Soybean	nucleus	53.24	51.69
Solyc06g008600.2.1	Tomato	nucleus	49.31	50.96
Solyc06g084040.2.1	Tomato	nucleus	49.77	49.88
KRH71326	Soybean	mitochondrion, nucleus	47.69	47.8
PGSC0003DMT400051660	Potato	nucleus	50.0	47.79
KRH32110	Soybean	nucleus	47.22	47.55
GSMUA_Achr9P10710_001	Banana	nucleus	43.75	47.49
PGSC0003DMT400013629	Potato	nucleus	30.79	45.39
Os03t0741700-00	Rice	cytosol	18.98	42.71
GSMUA_Achr5P03230_001	Banana	nucleus	42.82	42.05
GSMUA_Achr4P17750_001	Banana	nucleus	36.57	40.62
Bra015526.1-P	Field mustard	nucleus	21.76	38.37
Os12t0600200-03	Rice	cytosol, nucleus	29.63	37.21
TraesCS5D01G391100.1	Wheat	mitochondrion	31.71	36.53
Bra015525.1-P	Field mustard	cytosol	34.95	36.04
TraesCS5B01G382100.1	Wheat	nucleus	42.82	35.85
TraesCS5D01G388500.1	Wheat	nucleus	43.06	35.77
TraesCS5A01G381800.1	Wheat	mitochondrion	31.02	35.73
HORVU5Hr1G093720.3	Barley	nucleus	43.06	35.7
TraesCS5A01G378600.1	Wheat	nucleus	41.9	35.63
Zm00001d041405_P001	Maize	nucleus	39.35	34.98
KXG37982	Sorghum	nucleus	41.44	34.69
Zm00001d030985_P001	Maize	nucleus	38.19	34.66
TraesCS5D01G069800.1	Wheat	nucleus	37.27	34.11
Zm00001d033322_P001	Maize	nucleus	41.44	34.03
TraesCS5B01G385300.1	Wheat	mitochondrion	31.48	34.0
Os03t0632800-01	Rice	nucleus	33.8	33.8
TraesCS5A01G058000.1	Wheat	nucleus	36.81	33.69
TraesCS5B01G065600.1	Wheat	cytosol	36.34	33.26
HORVU5Hr1G014430.6	Barley	nucleus	35.65	32.49
Zm00001d013303_P001	Maize	nucleus	27.31	30.33
KXG37592	Sorghum	mitochondrion, nucleus	34.03	30.12
OQU79520	Sorghum	nucleus	38.43	30.07
HORVU5Hr1G094160.2	Barley	plastid	30.32	29.57
Zm00001d033967_P001	Maize	nucleus	25.0	28.27
Bra001901.1-P	Field mustard	nucleus	25.93	24.19

Protein Annotations

EnsemblPlants:Bra018304.1	EnsemblPlants:Bra018304.1-P	EnsemblPlantsGene:Bra018304	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR10825	PANTHER:PTHR10825:SF70	PFscan:PS50089	SEG:seg
SUPFAM:SSF57850	UniParc:UPI0002547AC8	UniProt:M4DP64	MapMan:12.3.5.1.1.1	:	:

Description

AT2G30580 (E=2e-191) DRIP2 | DRIP2 (DREB2A-INTERACTING PROTEIN 2); protein binding / ubiquitin-protein ligase/ zinc ion binding

Coordinates

chrA05:-:7326273..7329861

Molecular Weight (calculated)

48762.0 Da

IEP (calculated)

9.113

GRAVY (calculated)

-0.707

Length

432 amino acids

Sequence
(BLAST)

001: MEGEMVAKVK RETVVACMTC SLCDNLLRDA TTISECLHTW VSHALLYPAF CRKCIYEKIT EDEIESCPVC DIDLGGAPLE KLRPDHILQD LKAKIFTPKR
101: KRERAPEVVS SITLPARRKE RSISSLVVDT PRVSAQTGTT GKRTKSLMRK DVRGSGSFTK RTVKKEEEIG DDHTESGSSP ETLKDFTQSK RQSSYADPSQ
201: SLSNRRNKDG AEPWDSKLNL WKPLNFLVDV ANGTKSEHGN ASHADVQGNK TKTKDYKRKC KLEEEIRNNG DPTTSETATV KRTRRTRRER SSTFGDSRIP
301: PLPDSESLKQ ERRKGPVWFS LVASNNQLTD FREGETSLPQ IPANYLRIRD GNIPVSFIQK YLMRKLDLKS ETEVEIRCMG EAVIPTLELH SLVELWLETT
401: SKHERVAATI GSSAKEFVMV LAYARKVPEC NN

Best Arabidopsis Sequence Match ( AT2G30580.2 )
(BLAST)

001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN

Arabidopsis Description

DRIP2DRIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VRI3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.