Factsheet for Bra009112.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001106.1-P
Bra004031.1-P
Bra004319.1-P
Bra006198.1-P
Bra006199.1-P
Bra007910.1-P
Bra008830.1-P
Bra010432.1-P
Bra012269.1-P
Bra012861.1-P
Bra015525.1-P
Bra015526.1-P
Bra016225.1-P
Bra017318.1-P
Bra017341.1-P
Bra018009.1-P
Bra018304.1-P
Bra021651.1-P
Bra022807.1-P
Bra023208.1-P
Bra023252.1-P
Bra023411.1-P
Bra023412.1-P
Bra025174.1-P
Bra025792.1-P
Bra026309.1-P
Bra026415.1-P
Bra027227.1-P
Bra030947.1-P
Bra033802.1-P
Bra035407.1-P
Bra035511.1-P
Bra036824.1-P
Bra039666.1-P
Bra040142.1-P
Bra040191.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G05410.1	Bra015525.1-P	AT1G06770.1	18552202
AT5G05410.1	Bra015526.1-P	AT1G06770.1	18552202
AT5G05410.1	Bra025792.1-P	AT1G20100.1	18552202
AT5G05410.1	Bra012269.1-P	AT1G21130.1	18552202
AT5G05410.1	Bra023208.1-P	AT1G31817.1	18552202
AT5G05410.1	Bra023252.1-P	AT1G32230.1	19548978
AT5G05410.1	Bra035511.1-P	AT1G32230.1	19548978
AT5G05410.1	Bra030947.1-P	AT1G53280.1	18552202
AT5G05410.1	Bra039666.1-P	AT1G53280.1	18552202
AT5G05410.1	Bra004031.1-P	AT1G68560.1	18552202
AT5G05410.1	Bra004319.1-P	AT1G68560.1	18552202
AT5G05410.1	Bra035407.1-P	AT1G68560.1	18552202
AT5G05410.1	Bra007910.1-P	AT1G70300.1	18552202
AT5G05410.1	Bra016225.1-P	AT1G70300.1	18552202
AT5G05410.1	Bra018304.1-P	AT2G30580.1	18552202
AT5G05410.1	Bra021651.1-P	AT2G30580.1	18552202
AT5G05410.1	Bra022807.1-P	AT2G30580.1	18552202
AT5G05410.1	Bra017318.1-P	AT2G35500.1	18552202
AT5G05410.1	Bra040142.1-P	AT3G04260.1	18552202
AT5G05410.1	Bra001106.1-P	AT3G04480.1	18552202
AT5G05410.1	Bra040191.1-P	AT3G04480.1	18552202
AT5G05410.1	Bra027227.1-P	AT3G15580.1	18552202
AT5G05410.1	Bra017341.1-P	AT3G25920.1	18552202
AT5G05410.1	Bra025174.1-P	AT3G25920.1	18552202
AT5G05410.1	Bra033802.1-P	AT3G46780.1	18552202
AT5G05410.1	Bra018009.1-P	AT3G49080.1	18552202
AT5G05410.1	Bra012861.1-P	AT3G51260.1	18552202
AT5G05410.1	Bra036824.1-P	AT3G51260.1	18552202
AT5G05410.1	Bra010432.1-P	AT4G26630.1	18552202
AT5G05410.1	Bra026415.1-P	AT4G26630.1	18552202
AT5G05410.1	Bra026309.1-P	AT4G27750.1	18552202
AT5G05410.1	Bra006198.1-P	AT5G13430.1	18552202
AT5G05410.1	Bra006199.1-P	AT5G13430.1	18552202
AT5G05410.1	Bra008830.1-P	AT5G13430.1	18552202
AT5G05410.1	Bra023411.1-P	AT5G13430.1	18552202
AT5G05410.1	Bra023412.1-P	AT5G13430.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70151	Canola	nucleus	96.36	96.36
Bra028759.1-P	Field mustard	nucleus	63.94	69.18
Bra005852.1-P	Field mustard	nucleus	66.97	67.38
AT5G05410.1	Thale cress	nucleus	63.94	62.99
Bra034159.1-P	Field mustard	nucleus	50.0	56.9
Bra029889.1-P	Field mustard	nucleus	48.18	50.64
Bra001386.1-P	Field mustard	nucleus	51.82	44.53
Bra008200.1-P	Field mustard	nucleus	19.09	31.82
Bra015840.1-P	Field mustard	nucleus, plastid	19.7	31.55
Bra003752.1-P	Field mustard	nucleus	19.39	31.37
HORVU6Hr1G050500.2	Barley	nucleus	27.88	30.67
Bra017011.1-P	Field mustard	nucleus	30.91	30.36
Bra005113.1-P	Field mustard	nucleus	22.12	29.55
HORVU6Hr1G050520.2	Barley	nucleus	20.91	29.11
KXG21735	Sorghum	nucleus	29.39	28.87
Zm00001d010048_P004	Maize	nucleus	29.39	26.43
Bra007341.1-P	Field mustard	nucleus	21.52	26.3
TraesCS1D01G223600.2	Wheat	nucleus	30.91	26.09
TraesCS1B01G235100.2	Wheat	nucleus	30.61	26.03
TraesCS1A01G221900.1	Wheat	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	30.61	24.82
Bra006460.1-P	Field mustard	nucleus	21.82	24.74
Bra023674.1-P	Field mustard	nucleus	21.52	24.65
Bra014617.1-P	Field mustard	nucleus	18.79	23.94
HORVU1Hr1G060490.5	Barley	plasma membrane	31.21	22.79
Bra002159.1-P	Field mustard	nucleus	20.91	22.55
Bra004978.1-P	Field mustard	nucleus	18.18	18.93
Bra000178.1-P	Field mustard	nucleus	16.36	16.07

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra009112	EnsemblPlants:Bra009112.1
EnsemblPlants:Bra009112.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009408	GO:GO:0009414	GO:GO:0009628	GO:GO:0009987	GO:GO:0010224	GO:GO:0010286
GO:GO:0042542	GO:GO:0043565	GO:GO:0044212	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4CY15
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF2	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0002544A88	SEG:seg	:	:	:

Description

AT5G05410 (E=9e-073) DREB2A, DREB2 | DREB2A; DNA binding / transcription activator/ transcription factor

Coordinates

chrA10:+:15285803..15286795

Molecular Weight (calculated)

36820.7 Da

IEP (calculated)

4.916

GRAVY (calculated)

-0.856

Length

330 amino acids

Sequence
(BLAST)

001: MAVYEHNKTE FDTTKKRKTR SRRDGTTVAD RIKMWKEYND TVQESPTKKR KVPAKGSKKG CMKGKGGPEN GGCSFRGVRQ RTWGKWGAEI REPNRGSRLW
101: LGTFPTAEKA AAAYDEAAKA MYGPLARVNF PQASVSDVAS TSSRSEVCTV ETPGVVHVKT EDADCESPMA RVENDVHEGA EEMKMDVNVH AAVDTPSKDW
201: LSEIEQEYWT GLLEEKQKQK EQEMVAAGNF QKQPDALSVS DYGWPADLYQ NQWNSLEMFD VSELLGDLNG DIFTDTKQSQ CLGDNVGGGL PEPEKEQLQS
301: LGSNYRLSPL QHEAQDGSDF FDLSFLDVKN

Best Arabidopsis Sequence Match ( AT5G05410.1 )
(BLAST)

001: MAVYDQSGDR NRTQIDTSRK RKSRSRGDGT TVAERLKRWK EYNETVEEVS TKKRKVPAKG SKKGCMKGKG GPENSRCSFR GVRQRIWGKW VAEIREPNRG
101: SRLWLGTFPT AQEAASAYDE AAKAMYGPLA RLNFPRSDAS EVTSTSSQSE VCTVETPGCV HVKTEDPDCE SKPFSGGVEP MYCLENGAEE MKRGVKADKH
201: WLSEFEHNYW SDILKEKEKQ KEQGIVETCQ QQQQDSLSVA DYGWPNDVDQ SHLDSSDMFD VDELLRDLNG DDVFAGLNQD RYPGNSVANG SYRPESQQSG
301: FDPLQSLNYG IPPFQLEGKD GNGFFDDLSY LDLEN

Arabidopsis Description

DREB2ADehydration-responsive element-binding protein 2A [Source:UniProtKB/Swiss-Prot;Acc:O82132]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.