Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92610 | Canola | nucleus | 100.0 | 100.0 |
| CDY25420 | Canola | nucleus | 96.73 | 90.24 |
| Bra023674.1-P | Field mustard | nucleus | 76.47 | 81.25 |
| Bra006460.1-P | Field mustard | nucleus | 75.82 | 79.73 |
| AT5G18450.1 | Thale cress | nucleus | 77.12 | 76.87 |
| PGSC0003DMT400073853 | Potato | nucleus | 23.53 | 44.72 |
| Solyc04g050750.1.1 | Tomato | nucleus | 23.2 | 44.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.84 | 37.62 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 23.53 | 36.92 |
| Bra008200.1-P | Field mustard | nucleus | 23.53 | 36.36 |
| Bra015840.1-P | Field mustard | nucleus, plastid | 23.86 | 35.44 |
| Bra003752.1-P | Field mustard | nucleus | 23.53 | 35.29 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 22.22 | 35.23 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 25.16 | 33.48 |
| Os08t0565200-01 | Rice | nucleus | 25.16 | 33.48 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 25.16 | 33.19 |
| TraesCS2B01G529200.1 | Wheat | plastid | 20.91 | 33.16 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 24.84 | 32.9 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 25.16 | 31.05 |
| Bra005113.1-P | Field mustard | nucleus | 22.22 | 27.53 |
| Bra007341.1-P | Field mustard | nucleus | 23.53 | 26.67 |
| Bra014617.1-P | Field mustard | nucleus | 22.55 | 26.64 |
| Bra034159.1-P | Field mustard | nucleus | 23.53 | 24.83 |
| Bra029889.1-P | Field mustard | nucleus | 23.53 | 22.93 |
| Bra017011.1-P | Field mustard | nucleus | 24.18 | 22.02 |
| Bra005852.1-P | Field mustard | nucleus | 23.53 | 21.95 |
| EER92302 | Sorghum | nucleus | 24.84 | 21.65 |
| Bra028759.1-P | Field mustard | nucleus | 21.57 | 21.64 |
| Zm00001d049889_P001 | Maize | nucleus | 24.84 | 21.59 |
| Bra009112.1-P | Field mustard | nucleus | 22.55 | 20.91 |
| Zm00001d031861_P001 | Maize | nucleus | 24.51 | 20.89 |
| OQU80673 | Sorghum | nucleus | 24.84 | 19.59 |
| Bra004978.1-P | Field mustard | nucleus | 20.26 | 19.56 |
| Bra000178.1-P | Field mustard | nucleus | 21.24 | 19.35 |
| Bra001386.1-P | Field mustard | nucleus | 24.18 | 19.27 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlantsGene:Bra002159 | EnsemblPlants:Bra002159.1 |
| EnsemblPlants:Bra002159.1-P | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M4CD78 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31241 | PANTHER:PTHR31241:SF17 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002543943 | SEG:seg |
Description
AT5G18450 (E=7e-123) | AP2 domain-containing transcription factor, putative
Coordinates
chrA10:+:11190348..11191268
Molecular Weight (calculated)
33926.1 Da
IEP (calculated)
6.260
GRAVY (calculated)
-0.875
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEQPPAKK RNMGRSRKGC MKGKGGPQNA TCTFRGVRQR TWGKWVAEIR EPNRGTRLWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLL HPQQQQQKQC
101: VNRNLSFSGH GSGSWGYKFD TVRGLELGLG TSNEARGSWS GGFSFLQEDD YHNSNRYVSS SGSNLSWLLP KRSSSQDQES VNAASGSGGQ TFSTKLKPQN
201: LMMTPSDYGS SNGVWSRFLA GQQENKIEYD VSSSCGSSDN KESVSAPSGE SGDAGEGLHR PEVEEETGYL EMENLLEIDD LGLLIGKNGD FKNWCCDEFQ
301: HAWNWF
101: VNRNLSFSGH GSGSWGYKFD TVRGLELGLG TSNEARGSWS GGFSFLQEDD YHNSNRYVSS SGSNLSWLLP KRSSSQDQES VNAASGSGGQ TFSTKLKPQN
201: LMMTPSDYGS SNGVWSRFLA GQQENKIEYD VSSSCGSSDN KESVSAPSGE SGDAGEGLHR PEVEEETGYL EMENLLEIDD LGLLIGKNGD FKNWCCDEFQ
301: HAWNWF
001: MEEEQPPAKK RNMGRSRKGC MKGKGGPENA TCTFRGVRQR TWGKWVAEIR EPNRGTRLWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLV HPQQQQQVVV
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF
Arabidopsis Description
DREB2GDehydration-responsive element-binding protein 2G [Source:UniProtKB/Swiss-Prot;Acc:P61827]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.