Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G244800.1 | Wheat | nucleus | 87.5 | 93.53 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 86.69 | 93.48 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 86.29 | 92.64 |
| Os08t0565200-01 | Rice | nucleus | 55.24 | 59.57 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 45.16 | 58.03 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 40.73 | 51.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.94 | 51.49 |
| Zm00001d031861_P001 | Maize | nucleus | 56.85 | 39.28 |
| PGSC0003DMT400073853 | Potato | nucleus | 25.4 | 39.13 |
| Zm00001d049889_P001 | Maize | nucleus | 54.84 | 38.64 |
| Solyc04g050750.1.1 | Tomato | nucleus | 24.19 | 37.27 |
| Bra008200.1-P | Field mustard | nucleus | 29.03 | 36.36 |
| CDY39036 | Canola | nucleus | 29.03 | 36.36 |
| CDY20377 | Canola | nucleus | 28.23 | 35.35 |
| CDY70626 | Canola | nucleus | 29.03 | 35.29 |
| EER92302 | Sorghum | nucleus | 49.6 | 35.04 |
| AT1G75490.1 | Thale cress | nucleus | 29.03 | 34.95 |
| Bra003752.1-P | Field mustard | nucleus | 28.63 | 34.8 |
| CDX68128 | Canola | nucleus | 28.63 | 34.8 |
| OQU80673 | Sorghum | nucleus | 53.23 | 34.02 |
| CDY47519 | Canola | nucleus | 28.23 | 33.98 |
| Bra015840.1-P | Field mustard | nucleus, plastid | 28.23 | 33.98 |
| CDY64211 | Canola | nucleus, plastid | 27.42 | 33.01 |
| VIT_18s0001g13320.t01 | Wine grape | nucleus | 26.21 | 32.34 |
| KRH61095 | Soybean | nucleus | 31.85 | 32.24 |
| KRH51773 | Soybean | nucleus | 31.45 | 31.33 |
| KRH15125 | Soybean | nucleus | 31.45 | 27.56 |
| CDX70820 | Canola | nucleus | 30.65 | 27.14 |
| Solyc04g080910.1.1 | Tomato | nucleus | 27.02 | 27.02 |
| Bra023674.1-P | Field mustard | nucleus | 31.05 | 26.74 |
| CDY58117 | Canola | nucleus | 31.05 | 26.64 |
| HORVU6Hr1G050520.2 | Barley | nucleus | 25.4 | 26.58 |
| Bra006460.1-P | Field mustard | nucleus | 31.05 | 26.46 |
| KRH05892 | Soybean | nucleus | 30.24 | 26.13 |
| CDY02629 | Canola | nucleus | 30.24 | 26.04 |
| PGSC0003DMT400009506 | Potato | nucleus | 27.42 | 25.95 |
| CDX92610 | Canola | nucleus | 31.05 | 25.16 |
| Bra002159.1-P | Field mustard | nucleus | 31.05 | 25.16 |
| AT5G18450.1 | Thale cress | nucleus | 30.65 | 24.76 |
| HORVU6Hr1G050500.2 | Barley | nucleus | 29.84 | 24.67 |
| CDY25420 | Canola | nucleus | 31.05 | 23.48 |
| HORVU1Hr1G060060.1 | Barley | nucleus, plastid | 23.79 | 19.22 |
| HORVU1Hr1G060490.5 | Barley | plasma membrane | 31.85 | 17.48 |
| HORVU1Hr1G070410.1 | Barley | nucleus | 22.98 | 14.73 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | UniProt:A0A287FXK1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU1Hr1G063100 | EnsemblPlants:HORVU1Hr1G063100.1 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 |
| PANTHER:PTHR31241:SF2 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000B4661AA | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:+:453457228..453458823
Molecular Weight (calculated)
26406.9 Da
IEP (calculated)
5.976
GRAVY (calculated)
-0.491
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: NTLARHQSME SMEPEVVAGM KQKKCCPLRR SRKGCMKGKG GPDNQQCPFR GVRQRTWGKW VAEIREPNRG ARLWLGTFAT ALDAARAYDA AARALYGDCA
101: RLNLSASPSQ VQVQVQVQLP PAQGSGANGN SPPGTPCCSS NNSNSNSSAS TPTGTPTDVD CSNWMQPSYC YGTAEAPEDF EAYVTRLPKA EDFGLEGFQE
201: VPLEVLAEAG GGVSIWDLSI GPDMMAAAAD SSAAACTVPQ QRLQQPTC
101: RLNLSASPSQ VQVQVQVQLP PAQGSGANGN SPPGTPCCSS NNSNSNSSAS TPTGTPTDVD CSNWMQPSYC YGTAEAPEDF EAYVTRLPKA EDFGLEGFQE
201: VPLEVLAEAG GGVSIWDLSI GPDMMAAAAD SSAAACTVPQ QRLQQPTC
001: MSSIEPKVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPES
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
Arabidopsis Description
DREB2DDehydration-responsive element-binding protein 2D [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.