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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015840.1-P Field mustard nucleus, plastid 98.54 98.54
CDY64211 Canola nucleus, plastid 96.6 96.6
CDY39036 Canola nucleus 81.07 84.34
AT1G75490.1 Thale cress nucleus 83.98 83.98
CDY70626 Canola nucleus 83.01 83.82
CDY20377 Canola nucleus 80.1 83.33
CDX68128 Canola nucleus 82.04 82.84
CDY33815 Canola nucleus 26.7 47.83
VIT_18s0001g13320.t01 Wine grape nucleus 41.26 42.29
KRH61095 Soybean nucleus 50.0 42.04
KRH51773 Soybean nucleus 49.51 40.96
KRH05892 Soybean nucleus 51.46 36.93
KRH15125 Soybean nucleus 48.54 35.34
Solyc04g080910.1.1 Tomato nucleus 42.23 35.08
GSMUA_Achr3P00320_001 Banana nucleus 32.04 33.85
HORVU2Hr1G111510.1 Barley nucleus 31.55 33.68
GSMUA_AchrUn_... Banana nucleus 33.01 33.66
PGSC0003DMT400009506 Potato nucleus 41.75 32.82
TraesCS2B01G529200.1 Wheat plastid 30.58 32.64
TraesCS1B01G256000.1 Wheat nucleus 33.98 30.43
TraesCS1A01G244800.1 Wheat nucleus 33.98 30.17
Os08t0565200-01 Rice nucleus 33.5 30.0
TraesCS1D01G244500.1 Wheat nucleus 33.5 29.87
HORVU1Hr1G063100.1 Barley nucleus 33.98 28.23
CDX93190 Canola nucleus 28.64 27.7
CDX70820 Canola nucleus 36.89 27.14
CDY71905 Canola nucleus 30.1 25.41
CDY58117 Canola nucleus 34.95 24.91
CDY02629 Canola nucleus 34.47 24.65
CDY54455 Canola nucleus 29.13 24.29
CDX92610 Canola nucleus 35.44 23.86
CDY06088 Canola nucleus 30.1 22.96
CDX72012 Canola nucleus 30.1 22.71
CDY25420 Canola nucleus 35.44 22.26
CDY36289 Canola nucleus 31.07 21.99
CDX88955 Canola nucleus 27.67 21.92
CDY52095 Canola nucleus 27.67 21.43
Zm00001d049889_P001 Maize nucleus 36.41 21.31
CDY04950 Canola nucleus 33.5 21.3
CDY67039 Canola nucleus 30.1 21.23
CDY61527 Canola nucleus 29.61 20.75
Zm00001d031861_P001 Maize nucleus 35.44 20.33
EER92302 Sorghum nucleus 33.98 19.94
CDY52149 Canola nucleus 31.55 19.82
CDY52924 Canola nucleus 32.04 19.64
CDY00987 Canola nucleus 29.61 19.61
CDY08557 Canola nucleus 29.61 19.43
CDX70151 Canola nucleus 31.07 19.39
OQU80673 Sorghum nucleus 36.41 19.33
CDX98843 Canola nucleus 31.07 19.16
CDY52427 Canola nucleus 29.13 18.58
CDY54991 Canola nucleus 28.64 17.51
CDY07614 Canola nucleus 28.16 17.26
CDX73896 Canola nucleus 31.55 17.02
CDY00719 Canola nucleus 4.85 4.22
CDY33814 Canola nucleus 0.97 2.3
Protein Annotations
MapMan:15.5.7.2Gene3D:3.30.730.10GO:A0A078IDU7UniProt:A0A078IDU7InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sf
EnsemblPlants:CDY47519ProteinID:CDY47519ProteinID:CDY47519.1InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00087581001InterPro:IPR001471InterPro:IPR036955PFAM:PF00847
PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31241PANTHER:PTHR31241:SF18SMART:SM00380SUPFAM:SSF54171
UniParc:UPI0004EECE27:::::
Description
BnaAnng09170DBnaAnng09170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDU7]
Coordinates
chrLK032719:-:133333..133953
Molecular Weight (calculated)
23121.6 Da
IEP (calculated)
6.269
GRAVY (calculated)
-0.812
Length
206 amino acids
Sequence
(BLAST)
001: MSSIEPNVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPQE
101: SVRSYPETRQ TPSSNSGGKS DCWFNKESPC SSNEMSSWGT REEISWENMN ADLPVTDDSS IWEEATMSLG FPWVHEGDDN FSAFNTCISG GYSNWDSFNF
201: PTFRFH
Best Arabidopsis Sequence Match ( AT1G75490.1 )
(BLAST)
001: MSSIEPKVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPES
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
Arabidopsis Description
DREB2DDehydration-responsive element-binding protein 2D [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.