Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54455 | Canola | nucleus | 95.08 | 93.93 |
| CDY61527 | Canola | nucleus | 97.13 | 80.61 |
| AT2G38340.1 | Thale cress | nucleus | 67.21 | 67.21 |
| CDY33815 | Canola | nucleus | 21.31 | 45.22 |
| CDY39036 | Canola | nucleus | 26.23 | 32.32 |
| CDY20377 | Canola | nucleus | 25.82 | 31.82 |
| CDX68128 | Canola | nucleus | 26.23 | 31.37 |
| CDY70626 | Canola | nucleus | 26.23 | 31.37 |
| CDY47519 | Canola | nucleus | 25.41 | 30.1 |
| CDY64211 | Canola | nucleus, plastid | 25.41 | 30.1 |
| CDX93190 | Canola | nucleus | 25.82 | 29.58 |
| CDY36289 | Canola | nucleus | 31.97 | 26.8 |
| CDY67039 | Canola | nucleus | 31.56 | 26.37 |
| CDY00987 | Canola | nucleus | 32.79 | 25.72 |
| CDY08557 | Canola | nucleus | 32.38 | 25.16 |
| CDY04950 | Canola | nucleus | 32.79 | 24.69 |
| CDY02629 | Canola | nucleus | 29.1 | 24.65 |
| CDY52149 | Canola | nucleus | 32.79 | 24.39 |
| CDY58117 | Canola | nucleus | 28.69 | 24.22 |
| EES18376 | Sorghum | mitochondrion | 23.36 | 23.95 |
| CDX70820 | Canola | nucleus | 27.46 | 23.93 |
| CDX88955 | Canola | nucleus | 25.41 | 23.85 |
| KRH49463 | Soybean | nucleus | 34.02 | 23.58 |
| CDY52095 | Canola | nucleus | 25.41 | 23.31 |
| CDY52924 | Canola | nucleus | 31.97 | 23.21 |
| CDX98843 | Canola | nucleus | 31.56 | 23.05 |
| CDY06088 | Canola | nucleus | 25.41 | 22.96 |
| CDX92610 | Canola | nucleus | 28.69 | 22.88 |
| CDX72012 | Canola | nucleus | 25.41 | 22.71 |
| CDX70151 | Canola | nucleus | 30.33 | 22.42 |
| Zm00001d038446_P001 | Maize | vacuole | 25.0 | 21.86 |
| CDY25420 | Canola | nucleus | 28.69 | 21.34 |
| CDX73896 | Canola | nucleus | 33.2 | 21.2 |
| Os05t0473300-01 | Rice | nucleus | 21.72 | 20.31 |
| Solyc10g076370.1.1 | Tomato | nucleus | 32.38 | 19.51 |
| Solyc10g076380.1.1 | Tomato | nucleus | 25.82 | 19.5 |
| CDY54991 | Canola | nucleus | 25.41 | 18.4 |
| CDY52427 | Canola | nucleus | 23.77 | 17.96 |
| PGSC0003DMT400041064 | Potato | nucleus | 33.2 | 17.72 |
| CDY07614 | Canola | nucleus | 23.77 | 17.26 |
| TraesCS1B01G307000.1 | Wheat | nucleus | 25.82 | 16.36 |
| HORVU1Hr1G070410.1 | Barley | nucleus | 25.41 | 16.02 |
| KRH00328 | Soybean | nucleus | 33.61 | 15.56 |
| PGSC0003DMT400041065 | Potato | nucleus | 26.23 | 14.61 |
| CDY33814 | Canola | nucleus | 2.46 | 6.9 |
| CDY00719 | Canola | nucleus | 4.92 | 5.06 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078JZV8 | UniProt:A0A078JZV8 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY71905 | ProteinID:CDY71905 | ProteinID:CDY71905.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00022359001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF2 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EB71D1 | SEG:seg | : | : | : | : |
Description
BnaCnng75020DBnaCnng75020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZV8]
Coordinates
chrLK048045:-:648..1382
Molecular Weight (calculated)
27999.3 Da
IEP (calculated)
4.862
GRAVY (calculated)
-1.066
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEDNGPNQ SSSASIEPSR RRRRVAEPVD TTLSRWVKEE EEEEGLKRTR RVQAKGSRKG CMRGKGGPEN PVCRFRGVRQ RVWGKWVAEI REPVNQRGGN
101: SKRLWLGTFD TASEAALAYD RAASAMYGRY ARLNFPDGLG NGQDDEMKKT DEAESSRSYW LETYNVSETG NSVVDKKDGE DYLYEDCIEL GQEKIENLGR
201: MADNEIVKSE EDYMFDGFEY GLLYNESGYY HGGGFDPYLE HFRF
101: SKRLWLGTFD TASEAALAYD RAASAMYGRY ARLNFPDGLG NGQDDEMKKT DEAESSRSYW LETYNVSETG NSVVDKKDGE DYLYEDCIEL GQEKIENLGR
201: MADNEIVKSE EDYMFDGFEY GLLYNESGYY HGGGFDPYLE HFRF
001: MEKEDNGSKQ SSSASVVSSR RRRRVVEPVE ATLQRWEEEG LARARRVQAK GSKKGCMRGK GGPENPVCRF RGVRQRVWGK WVAEIREPVS HRGANSSRSK
101: RLWLGTFATA AEAALAYDRA ASVMYGPYAR LNFPEDLGGG RKKDEEAESS GGYWLETNKA GNGVIETEGG KDYVVYNEDA IELGHDKTQN PMTDNEIVNP
201: AVKSEEGYSY DRFKLDNGLL YNEPQSSSYH QGGGFDSYFE YFRF
101: RLWLGTFATA AEAALAYDRA ASVMYGPYAR LNFPEDLGGG RKKDEEAESS GGYWLETNKA GNGVIETEGG KDYVVYNEDA IELGHDKTQN PMTDNEIVNP
201: AVKSEEGYSY DRFKLDNGLL YNEPQSSSYH QGGGFDSYFE YFRF
Arabidopsis Description
DREB2EDehydration-responsive element-binding protein 2E [Source:UniProtKB/Swiss-Prot;Acc:O80917]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.