Factsheet for Solyc10g076370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041064	Potato	nucleus	85.43	75.71
PGSC0003DMT400041065	Potato	nucleus	75.56	69.86
Solyc10g076380.1.1	Tomato	nucleus	53.09	66.56
Solyc10g080310.1.1	Tomato	nucleus	10.86	60.27
Solyc04g050750.1.1	Tomato	nucleus	14.57	36.65
Bra005113.1-P	Field mustard	nucleus	20.0	32.79
AT2G38340.1	Thale cress	nucleus	19.75	32.79
CDY71905	Canola	nucleus	19.51	32.38
CDY54455	Canola	nucleus	19.51	31.98
Solyc06g050520.1.1	Tomato	nucleus	21.73	29.33
CDY61527	Canola	nucleus	19.26	26.53
Solyc04g080910.1.1	Tomato	nucleus	15.8	25.81
Solyc05g052410.1.1	Tomato	nucleus	24.44	24.81
KRH49463	Soybean	nucleus	21.48	24.72
EES18376	Sorghum	mitochondrion	12.84	21.85
Os05t0473300-01	Rice	nucleus	12.59	19.54
Zm00001d038446_P001	Maize	vacuole	13.33	19.35
KRH00328	Soybean	nucleus	22.47	17.27
TraesCS1B01G307000.1	Wheat	nucleus	14.81	15.58
HORVU1Hr1G070410.1	Barley	nucleus	14.57	15.25

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0044212	GO:GO:0045893
InterPro:IPR001471	InterPro:IPR036955	UniProt:K4D1X9	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31241	PANTHER:PTHR31241:SF17	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:Solyc10g076370.1	EnsemblPlants:Solyc10g076370.1.1
UniParc:UPI0002769D82	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:59336266..59337483

Molecular Weight (calculated)

46685.3 Da

IEP (calculated)

4.374

GRAVY (calculated)

-0.955

Length

405 amino acids

Sequence
(BLAST)

001: MDFYDNRKVK RRRNGSDSIE EILLRWKNFN QEVNWNHEQV KKKRKSPGNG SNKGCMPGKG GPENSGCKYR GVRQRTWGKW VAEIREPVYI SGQYKSKGKR
101: LWLGTYSTAG DAAVAYDEAA KVMYGSNAIL NFPNSSNGNI TRTSSGQSSI DHEESVVDDE KKTEIESDLK DDDGGVVVNM DLSYDYANHG SPACSWTEEE
201: LEVITEENSE IELTNLECDS RFFHKSHVKV ERPIMEEEID EDEFVHNDVS NTIDVEPTVM FSKDDFSRLD ETRNSNDQIV LQDMDFRSSE NLNEDVSTRL
301: EYMEHFLMDD NCSMEAANIS DIICLTENHD EAFDFQRFLE ESFDFELNYA KNEEQFDCTY AYNQQIDHQN SETNFEIRSD GIRKEKNLHG FGLDDFGASN
401: NQRKI

Best Arabidopsis Sequence Match ( AT2G40340.3 )
(BLAST)

001: MPSEIVDRKR KSRGTRDVAE ILRQWREYNE QIEAESCIDG GGPKSIRKPP PKGSRKGCMK GKGGPENGIC DYRGVRQRRW GKWVAEIREP DGGARLWLGT
101: FSSSYEAALA YDEAAKAIYG QSARLNLPEI TNRSSSTAAT ATVSGSVTAF SDESEVCARE DTNASSGFGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD
201: INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST

Arabidopsis Description

DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.