Factsheet for Solyc10g080310.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33815	Canola	nucleus	82.19	52.17
Zm00001d043409_P001	Maize	nucleus	65.75	38.4
Solyc04g050750.1.1	Tomato	nucleus	63.01	28.57
Bra014617.1-P	Field mustard	nucleus	83.56	23.55
CDX88955	Canola	nucleus	83.56	23.46
KRG95297	Soybean	nucleus	90.41	23.4
KRH66977	Soybean	nucleus	90.41	23.24
KRG93713	Soybean	nucleus	86.3	23.08
PGSC0003DMT400060970	Potato	nucleus	98.63	23.0
Bra007341.1-P	Field mustard	nucleus	84.93	22.96
CDY06088	Canola	nucleus	84.93	22.96
CDY52095	Canola	nucleus	83.56	22.93
CDX72012	Canola	nucleus	84.93	22.71
AT3G57600.1	Thale cress	nucleus	84.93	22.38
VIT_08s0007g08150.t01	Wine grape	nucleus	87.67	22.3
KRG93709	Soybean	nucleus	69.86	21.25
KRH71963	Soybean	nucleus	84.93	20.06
KRH16554	Soybean	nucleus	69.86	19.69
KRH33104	Soybean	nucleus	84.93	19.44
KXG40072	Sorghum	nucleus	79.45	18.35
Zm00001d048296_P001	Maize	nucleus	76.71	18.24
Os03t0174400-00	Rice	nucleus	79.45	18.24
Zm00001d027870_P001	Maize	nucleus	79.45	18.07
Zm00001d048297_P001	Maize	nucleus	79.45	18.01
TraesCS4B01G290100.1	Wheat	nucleus	76.71	17.78
TraesCS4D01G289200.1	Wheat	nucleus	76.71	17.55
TraesCS4A01G013600.1	Wheat	nucleus	76.71	17.5
Solyc04g080910.1.1	Tomato	nucleus	56.16	16.53
Solyc06g050520.1.1	Tomato	nucleus	65.75	16.0
Solyc10g076380.1.1	Tomato	nucleus	58.9	13.31
Solyc05g052410.1.1	Tomato	nucleus	65.75	12.03
Solyc10g076370.1.1	Tomato	nucleus	60.27	10.86
GSMUA_Achr3P29800_001	Banana	mitochondrion	27.4	10.64
GSMUA_Achr7P27150_001	Banana	nucleus	28.77	8.08
CDY33814	Canola	nucleus	0.0	0.0

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
UniProt:K4D2S1	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31241
PANTHER:PTHR31241:SF3	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:Solyc10g080310.1	EnsemblPlants:Solyc10g080310.1.1	UniParc:UPI000276933E

Description

No Description!

Coordinates

chr10:+:61607325..61607596

Molecular Weight (calculated)

8383.0 Da

IEP (calculated)

10.692

GRAVY (calculated)

-1.077

Length

73 amino acids

Sequence
(BLAST)

1: MDSYKRNPLK PWKKGPARGK GGPQNALCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA TAEEAAMAYD EAS

Best Arabidopsis Sequence Match ( AT3G57600.1 )
(BLAST)

001: MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD

Arabidopsis Description

DREB2FDehydration-responsive element-binding protein 2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SVX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.