Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG40072 | Sorghum | nucleus | 90.34 | 91.77 |
Zm00001d048297_P001 | Maize | nucleus | 85.05 | 84.78 |
Zm00001d048296_P001 | Maize | nucleus | 80.69 | 84.36 |
Zm00001d043409_P001 | Maize | nucleus | 32.71 | 84.0 |
Solyc10g080310.1.1 | Tomato | nucleus | 18.07 | 79.45 |
TraesCS4B01G290100.1 | Wheat | nucleus | 65.11 | 66.35 |
TraesCS4D01G289200.1 | Wheat | nucleus | 64.49 | 64.89 |
CDY33815 | Canola | nucleus | 23.05 | 64.35 |
TraesCS4A01G013600.1 | Wheat | nucleus | 63.86 | 64.06 |
VIT_08s0007g08150.t01 | Wine grape | nucleus | 42.06 | 47.04 |
KRG95297 | Soybean | nucleus | 38.32 | 43.62 |
KRH66977 | Soybean | nucleus | 38.32 | 43.31 |
Bra014617.1-P | Field mustard | nucleus | 33.96 | 42.08 |
CDX88955 | Canola | nucleus | 33.96 | 41.92 |
AT3G57600.1 | Thale cress | nucleus | 36.14 | 41.88 |
Bra007341.1-P | Field mustard | nucleus | 35.2 | 41.85 |
CDY06088 | Canola | nucleus | 34.89 | 41.48 |
KRG93713 | Soybean | nucleus | 35.2 | 41.39 |
CDX72012 | Canola | nucleus | 34.89 | 41.03 |
CDY52095 | Canola | nucleus | 33.96 | 40.98 |
PGSC0003DMT400060970 | Potato | nucleus | 39.56 | 40.58 |
KRG93709 | Soybean | nucleus | 30.22 | 40.42 |
KRH16554 | Soybean | nucleus | 32.4 | 40.15 |
KRH71963 | Soybean | nucleus | 38.63 | 40.13 |
KRH33104 | Soybean | nucleus | 38.32 | 38.56 |
GSMUA_Achr3P29800_001 | Banana | mitochondrion | 22.43 | 38.3 |
GSMUA_Achr7P27150_001 | Banana | nucleus | 25.55 | 31.54 |
Zm00001d038001_P001 | Maize | nucleus | 19.94 | 25.81 |
Zm00001d008665_P001 | Maize | nucleus | 20.87 | 25.67 |
Zm00001d049889_P001 | Maize | nucleus | 23.36 | 21.31 |
Zm00001d031861_P001 | Maize | nucleus | 23.68 | 21.17 |
Zm00001d010048_P004 | Maize | nucleus | 22.12 | 19.35 |
CDY33814 | Canola | nucleus | 4.98 | 18.39 |
Zm00001d038446_P001 | Maize | vacuole | 15.26 | 17.56 |
Protein Annotations
EntrezGene:103631782 | MapMan:15.5.7.2 | Gene3D:3.30.730.10 | UniProt:A0A060D220 | ProteinID:AIB05365.1 | InterPro:AP2/ERF_dom |
InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:IPR001471 | InterPro:IPR036955 | ProteinID:ONL94151.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
PANTHER:PTHR31241 | PANTHER:PTHR31241:SF3 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002215C4D | EnsemblPlantsGene:Zm00001d027870 |
EnsemblPlants:Zm00001d027870_P001 | EnsemblPlants:Zm00001d027870_T001 | SEG:seg | : | : | : |
Description
AP2-EREBP-transcription factor 38Dehydration-responsive element-binding protein 2F
Coordinates
chr1:+:16005938..16006903
Molecular Weight (calculated)
34079.9 Da
IEP (calculated)
6.433
GRAVY (calculated)
-0.377
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYGRKRAW KKGPTRGKGG PQNAACEYRG VRQRTWGKWV AEIREPNKRT RLWLGSFATA EEAALAYDEA ARRLYGPDAF LNLPHLRVSA AAAHQRIRWL
101: PASARGAAAA AVPAYGLLNL NAQHNVHVIH QRLQELKNNG SPAKPPPPAP RVSPAARQQQ LAPADHLPVA STSPCSTVTT HAAAAALPPP MSCFHALDLD
201: LEQAVATAAM TTVDDAEPFE GGGAFPPGAD KPQLDLREFL QQIGVLKTDD DGTATAKGSL HGDAADAGCF GGNGEFDWDA LAADLNDIAG AHGGANGGFQ
301: MDDLHEVDQF GTCLPIPVWD V
101: PASARGAAAA AVPAYGLLNL NAQHNVHVIH QRLQELKNNG SPAKPPPPAP RVSPAARQQQ LAPADHLPVA STSPCSTVTT HAAAAALPPP MSCFHALDLD
201: LEQAVATAAM TTVDDAEPFE GGGAFPPGAD KPQLDLREFL QQIGVLKTDD DGTATAKGSL HGDAADAGCF GGNGEFDWDA LAADLNDIAG AHGGANGGFQ
301: MDDLHEVDQF GTCLPIPVWD V
001: MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD
Arabidopsis Description
DREB2FDehydration-responsive element-binding protein 2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SVX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.