Factsheet for Zm00001d043409_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g080310.1.1	Tomato	nucleus	38.4	65.75
CDY33815	Canola	nucleus	49.6	53.91
Zm00001d048297_P001	Maize	nucleus	86.4	33.54
Os03t0174400-00	Rice	nucleus	84.8	33.33
Zm00001d027870_P001	Maize	nucleus	84.0	32.71
Zm00001d048296_P001	Maize	nucleus	80.0	32.57
KRG93713	Soybean	nucleus	60.8	27.84
KRG95297	Soybean	nucleus	61.6	27.3
VIT_08s0007g08150.t01	Wine grape	nucleus	61.6	26.83
KRH66977	Soybean	nucleus	60.8	26.76
KRG93709	Soybean	nucleus	51.2	26.67
Bra014617.1-P	Field mustard	nucleus	55.2	26.64
CDX88955	Canola	nucleus	55.2	26.54
CDY06088	Canola	nucleus	56.8	26.3
Bra007341.1-P	Field mustard	nucleus	56.8	26.3
KRH16554	Soybean	nucleus	54.4	26.25
CDX72012	Canola	nucleus	56.8	26.01
AT3G57600.1	Thale cress	nucleus	56.8	25.63
CDY52095	Canola	nucleus	53.6	25.19
PGSC0003DMT400060970	Potato	nucleus	62.4	24.92
KRH71963	Soybean	nucleus	60.0	24.27
KRH33104	Soybean	nucleus	58.4	22.88
Zm00001d038001_P001	Maize	nucleus	41.6	20.97
Zm00001d008665_P001	Maize	nucleus	39.2	18.77
GSMUA_Achr3P29800_001	Banana	mitochondrion	28.0	18.62
Zm00001d049889_P001	Maize	nucleus	44.8	15.91
Zm00001d031861_P001	Maize	nucleus	44.0	15.32
Zm00001d038446_P001	Maize	vacuole	32.0	14.34
GSMUA_Achr7P27150_001	Banana	nucleus	29.6	14.23
Zm00001d010048_P004	Maize	nucleus	40.0	13.62
CDY33814	Canola	nucleus	0.8	1.15

Protein Annotations

EntrezGene:103652479	MapMan:15.5.7.2	Gene3D:3.30.730.10	UniProt:A0A1D6NB64	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM37780.1	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF3	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0004DE83ED
EnsemblPlantsGene:Zm00001d043409	EnsemblPlants:Zm00001d043409_P001	EnsemblPlants:Zm00001d043409_T001	SEG:seg	:	:

Description

Dehydration-responsive element-binding protein 2F

Coordinates

chr3:-:199002822..199003199

Molecular Weight (calculated)

13939.7 Da

IEP (calculated)

10.823

GRAVY (calculated)

-0.198

Length

125 amino acids

Sequence
(BLAST)

001: MRGKGGPHTA ACEYRAVRQR TWGKWVAEIR EPNKRTRLWL GSFATAEEVA LAYDNAARRL YGPDAFLNLP HLRAFVVSSA ATHQRLRWLA ASARGAAAVP
101: AYGLLNLNAQ HNVYNLLAHV PLMDF

Best Arabidopsis Sequence Match ( AT3G57600.1 )
(BLAST)

001: MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD

Arabidopsis Description

DREB2FDehydration-responsive element-binding protein 2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SVX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.