Factsheet for Zm00001d048296_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40072	Sorghum	nucleus	85.34	82.91
Zm00001d027870_P001	Maize	nucleus	84.36	80.69
Zm00001d043409_P001	Maize	nucleus	32.57	80.0
Zm00001d048297_P001	Maize	nucleus	82.08	78.26
Solyc10g080310.1.1	Tomato	nucleus	18.24	76.71
TraesCS4B01G290100.1	Wheat	nucleus	65.15	63.49
TraesCS4D01G289200.1	Wheat	nucleus	64.5	62.07
CDY33815	Canola	nucleus	23.13	61.74
TraesCS4A01G013600.1	Wheat	nucleus	63.84	61.25
VIT_08s0007g08150.t01	Wine grape	nucleus	42.02	44.95
KRG95297	Soybean	nucleus	38.76	42.2
KRH66977	Soybean	nucleus	38.44	41.55
Bra014617.1-P	Field mustard	nucleus	34.85	41.31
AT3G57600.1	Thale cress	nucleus	37.13	41.16
CDX88955	Canola	nucleus	34.85	41.15
Bra007341.1-P	Field mustard	nucleus	35.83	40.74
CDY06088	Canola	nucleus	35.83	40.74
KRG93713	Soybean	nucleus	35.83	40.29
CDX72012	Canola	nucleus	35.83	40.29
CDY52095	Canola	nucleus	34.85	40.23
KRG93709	Soybean	nucleus	30.94	39.58
PGSC0003DMT400060970	Potato	nucleus	39.41	38.66
KRH16554	Soybean	nucleus	32.57	38.61
KRH71963	Soybean	nucleus	38.44	38.19
KRH33104	Soybean	nucleus	38.44	36.99
GSMUA_Achr3P29800_001	Banana	mitochondrion	22.15	36.17
GSMUA_Achr7P27150_001	Banana	nucleus	26.06	30.77
Zm00001d038001_P001	Maize	nucleus	20.52	25.4
Zm00001d008665_P001	Maize	nucleus	20.52	24.14
Zm00001d049889_P001	Maize	nucleus	23.45	20.45
Zm00001d031861_P001	Maize	nucleus	23.78	20.33
Zm00001d010048_P004	Maize	nucleus	22.15	18.53
CDY33814	Canola	nucleus	5.21	18.39
Zm00001d038446_P001	Maize	vacuole	15.64	17.2

Protein Annotations

EntrezGene:103639528	MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:AQL09323.1
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	UniProt:K7W2Q8	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31241
PANTHER:PTHR31241:SF3	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000220BB54	EnsemblPlantsGene:Zm00001d048296	EnsemblPlants:Zm00001d048296_P001
EnsemblPlants:Zm00001d048296_T001	SEG:seg	:	:	:	:

Description

AP2-EREBP-transcription factor 48Putative AP2/EREBP transcription factor superfamily protein

Coordinates

chr9:-:154056208..154057131

Molecular Weight (calculated)

32718.1 Da

IEP (calculated)

5.948

GRAVY (calculated)

-0.387

Length

307 amino acids

Sequence
(BLAST)

001: MESYGHKRAW KKEPTRGKGG PQNAACEYRG VRQRTWGKWV AEIREPNKRA RLWLGSFATA EEAALAYDEA ARRLYGTDVF LNLPHLRASG VSAAGAGNAH
101: ERLRWLPAAS ARGAAVPAYG LLNLNAQHNV HVIHQRLQEL KNNGSPADHL PAAASTSPCS TVTTRAAAAL PAPMSCFHAL EQAVTTVATR TTVDDAEPCE
201: GGACPSGADK PQIDLSEFLQ QIGVLNNTDD DGIRTTAKAS FRGDAAEAGC FGGNGEFDWD ALAADLNDIA GAGVHGGVNG GFQMDDLHEH EVEQFGTCLP
301: IPVWDVQ

Best Arabidopsis Sequence Match ( AT3G57600.1 )
(BLAST)

001: MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD

Arabidopsis Description

DREB2FDehydration-responsive element-binding protein 2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SVX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.