Factsheet for Zm00001d048297_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043409_P001	Maize	nucleus	33.54	86.4
Zm00001d027870_P001	Maize	nucleus	84.78	85.05
KXG40072	Sorghum	nucleus	83.23	84.81
Zm00001d048296_P001	Maize	nucleus	78.26	82.08
Solyc10g080310.1.1	Tomato	nucleus	18.01	79.45
CDY33815	Canola	nucleus	23.29	65.22
TraesCS4B01G290100.1	Wheat	nucleus	60.56	61.9
TraesCS4D01G289200.1	Wheat	nucleus	59.63	60.19
TraesCS4A01G013600.1	Wheat	nucleus	59.63	60.0
VIT_08s0007g08150.t01	Wine grape	nucleus	39.75	44.6
KRH66977	Soybean	nucleus	37.27	42.25
KRG95297	Soybean	nucleus	36.96	42.2
PGSC0003DMT400060970	Potato	nucleus	39.75	40.89
CDY06088	Canola	nucleus	33.85	40.37
Bra007341.1-P	Field mustard	nucleus	33.85	40.37
KRG93713	Soybean	nucleus	34.16	40.29
AT3G57600.1	Thale cress	nucleus	34.47	40.07
CDX72012	Canola	nucleus	33.85	39.93
Bra014617.1-P	Field mustard	nucleus	31.99	39.77
CDX88955	Canola	nucleus	31.99	39.62
KRH16554	Soybean	nucleus	31.37	39.0
KRH71963	Soybean	nucleus	37.27	38.84
KRG93709	Soybean	nucleus	28.88	38.75
CDY52095	Canola	nucleus	31.99	38.72
GSMUA_Achr3P29800_001	Banana	mitochondrion	22.36	38.3
KRH33104	Soybean	nucleus	36.96	37.3
GSMUA_Achr7P27150_001	Banana	nucleus	25.78	31.92
Zm00001d008665_P001	Maize	nucleus	22.05	27.2
Zm00001d038001_P001	Maize	nucleus	19.88	25.81
Zm00001d049889_P001	Maize	nucleus	22.67	20.74
Zm00001d031861_P001	Maize	nucleus	22.98	20.61
Zm00001d010048_P004	Maize	nucleus	22.05	19.35
Zm00001d038446_P001	Maize	vacuole	15.84	18.28
CDY33814	Canola	nucleus	4.35	16.09

Protein Annotations

EntrezGene:103639531	MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:AQL09324.1
ncoils:Coil	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:K7W2R5	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31241	PANTHER:PTHR31241:SF3	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000222108E	EnsemblPlantsGene:Zm00001d048297
EnsemblPlants:Zm00001d048297_P001	EnsemblPlants:Zm00001d048297_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 124Putative AP2/EREBP transcription factor superfamily protein

Coordinates

chr9:-:154094049..154095017

Molecular Weight (calculated)

34302.4 Da

IEP (calculated)

7.371

GRAVY (calculated)

-0.274

Length

322 amino acids

Sequence
(BLAST)

001: MQSYGRKRAW KKGPTRGKGG PQNAACEYRG VRQRTWGKWV AEIREPNKRT RLWLGSFATA EEAALAYDEA ARRLYGPDAF LNLPHLRASA VSSAAAHQRL
101: RWLSASARGA AAVPAYGLLN LNAQHNVRVI HQRLQELKNN GSPAKPPPSP SLRVSPSAPH KQLAPADHLP AVATTSPCSI VVVTHVHAAP AMSCFHALEQ
201: TVATVAMRTV DDAEPCEGGA CPPAADKPQI DLREFLQQIG VLNTDDDGIT ATAKAAFHAA GDAAVSCFVS GNGDFDWDVL AADLNDIAGA HGGANGGVQM
301: DDLHEHAVDQ FGTCLPIPVW DV

Best Arabidopsis Sequence Match ( AT3G57600.1 )
(BLAST)

001: MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD

Arabidopsis Description

DREB2FDehydration-responsive element-binding protein 2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SVX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.