Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g080310.1.1 | Tomato | nucleus | 22.38 | 84.93 |
| CDY33815 | Canola | nucleus | 33.21 | 80.0 |
| Bra014617.1-P | Field mustard | nucleus | 73.65 | 78.76 |
| Bra007341.1-P | Field mustard | nucleus | 75.81 | 77.78 |
| CDX88955 | Canola | nucleus | 72.92 | 77.69 |
| CDY52095 | Canola | nucleus | 74.37 | 77.44 |
| CDY06088 | Canola | nucleus | 75.45 | 77.41 |
| CDX72012 | Canola | nucleus | 75.45 | 76.56 |
| CDY33814 | Canola | nucleus | 19.49 | 62.07 |
| Zm00001d043409_P001 | Maize | nucleus | 25.63 | 56.8 |
| VIT_08s0007g08150.t01 | Wine grape | nucleus | 58.48 | 56.45 |
| KRG95297 | Soybean | nucleus | 55.23 | 54.26 |
| KRH66977 | Soybean | nucleus | 54.15 | 52.82 |
| KRG93713 | Soybean | nucleus | 49.1 | 49.82 |
| KRH16554 | Soybean | nucleus | 46.57 | 49.81 |
| KRG93709 | Soybean | nucleus | 42.96 | 49.58 |
| KRH71963 | Soybean | nucleus | 53.07 | 47.57 |
| KRH33104 | Soybean | nucleus | 52.71 | 45.77 |
| PGSC0003DMT400060970 | Potato | nucleus | 48.38 | 42.81 |
| GSMUA_Achr3P29800_001 | Banana | mitochondrion | 25.63 | 37.77 |
| Zm00001d048296_P001 | Maize | nucleus | 41.16 | 37.13 |
| KXG40072 | Sorghum | nucleus | 42.24 | 37.03 |
| TraesCS4B01G290100.1 | Wheat | nucleus | 41.88 | 36.83 |
| Os03t0174400-00 | Rice | nucleus | 42.24 | 36.79 |
| TraesCS4A01G013600.1 | Wheat | nucleus | 42.24 | 36.56 |
| TraesCS4D01G289200.1 | Wheat | nucleus | 41.88 | 36.36 |
| Zm00001d027870_P001 | Maize | nucleus | 41.88 | 36.14 |
| Zm00001d048297_P001 | Maize | nucleus | 40.07 | 34.47 |
| AT2G40350.2 | Thale cress | nucleus | 18.77 | 31.71 |
| AT1G75490.1 | Thale cress | nucleus | 23.47 | 31.55 |
| GSMUA_Achr7P27150_001 | Banana | nucleus | 29.24 | 31.15 |
| AT2G38340.1 | Thale cress | nucleus | 22.02 | 25.0 |
| AT5G18450.1 | Thale cress | nucleus | 24.55 | 22.15 |
| AT2G40340.6 | Thale cress | mitochondrion, nucleus, plastid | 27.08 | 21.55 |
| AT5G05410.1 | Thale cress | nucleus | 25.99 | 21.49 |
| AT3G11020.1 | Thale cress | nucleus | 24.55 | 20.61 |
| AT2G40220.1 | Thale cress | nucleus | 23.1 | 19.51 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:824929 | UniProt:A0A178VB25 | ProteinID:AEE79677.1 | EMBL:AK227217 |
| InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT3G57600 | EnsemblPlantsGene:AT3G57600 | RefSeq:AT3G57600 |
| TAIR:AT3G57600 | RefSeq:AT3G57600-TAIR-G | EnsemblPlants:AT3G57600.1 | TAIR:AT3G57600.1 | EMBL:AY087243 | Unigene:At.34819 |
| EMBL:BT028945 | ProteinID:CAB41195.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | InterPro:IPR001471 |
| InterPro:IPR036955 | RefSeq:NP_191319.1 | ProteinID:OAP03379.1 | PFAM:PF00847 | PIRSF:PIRSF038123 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31241 | PANTHER:PTHR31241:SF3 | UniProt:Q9SVX5 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00000A1FB1 |
| SEG:seg | : | : | : | : | : |
Description
DREB2FDehydration-responsive element-binding protein 2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SVX5]
Coordinates
chr3:+:21332774..21333918
Molecular Weight (calculated)
31573.6 Da
IEP (calculated)
5.110
GRAVY (calculated)
-0.869
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD
101: KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE
201: NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF DSSNFGSYDF EDDVSFPSIW DYYGSLD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.