Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39036 | Canola | nucleus | 84.47 | 87.88 |
| Bra008200.1-P | Field mustard | nucleus | 84.47 | 87.88 |
| CDY70626 | Canola | nucleus | 86.41 | 87.25 |
| CDY20377 | Canola | nucleus | 83.5 | 86.87 |
| Bra003752.1-P | Field mustard | nucleus | 85.44 | 86.27 |
| CDX68128 | Canola | nucleus | 85.44 | 86.27 |
| Bra015840.1-P | Field mustard | nucleus, plastid | 83.98 | 83.98 |
| CDY47519 | Canola | nucleus | 83.98 | 83.98 |
| CDY64211 | Canola | nucleus, plastid | 82.52 | 82.52 |
| VIT_18s0001g13320.t01 | Wine grape | nucleus | 42.23 | 43.28 |
| KRH61095 | Soybean | nucleus | 50.49 | 42.45 |
| KRH51773 | Soybean | nucleus | 50.0 | 41.37 |
| KRH05892 | Soybean | nucleus | 50.97 | 36.59 |
| KRH15125 | Soybean | nucleus | 49.03 | 35.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.47 | 35.15 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 32.52 | 34.36 |
| Solyc04g080910.1.1 | Tomato | nucleus | 41.26 | 34.27 |
| TraesCS2B01G529200.1 | Wheat | plastid | 32.04 | 34.2 |
| AT2G40350.2 | Thale cress | nucleus | 27.18 | 34.15 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 31.55 | 33.68 |
| PGSC0003DMT400009506 | Potato | nucleus | 40.78 | 32.06 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 34.95 | 31.3 |
| Os08t0565200-01 | Rice | nucleus | 34.95 | 31.3 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 34.95 | 31.03 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 34.47 | 30.74 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 34.95 | 29.03 |
| AT2G38340.1 | Thale cress | nucleus | 30.58 | 25.82 |
| AT5G18450.1 | Thale cress | nucleus | 35.44 | 23.78 |
| AT3G57600.1 | Thale cress | nucleus | 31.55 | 23.47 |
| Zm00001d049889_P001 | Maize | nucleus | 36.41 | 21.31 |
| Zm00001d031861_P001 | Maize | nucleus | 35.44 | 20.33 |
| EER92302 | Sorghum | nucleus | 34.47 | 20.23 |
| OQU80673 | Sorghum | nucleus | 35.92 | 19.07 |
| AT2G40220.1 | Thale cress | nucleus | 30.1 | 18.9 |
| AT5G05410.1 | Thale cress | nucleus | 30.58 | 18.81 |
| AT2G40340.6 | Thale cress | mitochondrion, nucleus, plastid | 31.55 | 18.68 |
| AT3G11020.1 | Thale cress | nucleus | 27.67 | 17.27 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:843885 | UniProt:A0A178W9T8 | ProteinID:AAF87124.1 | ProteinID:AEE35725.1 |
| EMBL:AK175902 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT1G75490 | EnsemblPlantsGene:AT1G75490 | RefSeq:AT1G75490 |
| TAIR:AT1G75490 | RefSeq:AT1G75490-TAIR-G | EnsemblPlants:AT1G75490.1 | TAIR:AT1G75490.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0043565 |
| GO:GO:0044212 | GO:GO:0045893 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_177681.2 | ProteinID:OAP13822.1 |
| PFAM:PF00847 | PO:PO:0000293 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF18 |
| UniProt:Q9LQZ2 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00000A4156 | SEG:seg | : |
Description
DREB2DDehydration-responsive element-binding protein 2D [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ2]
Coordinates
chr1:+:28335502..28336990
Molecular Weight (calculated)
22581.1 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.712
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSIEPKVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPES
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.