Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003752.1-P | Field mustard | nucleus | 96.08 | 96.08 |
| CDX68128 | Canola | nucleus | 96.08 | 96.08 |
| CDY39036 | Canola | nucleus | 84.8 | 87.37 |
| AT1G75490.1 | Thale cress | nucleus | 87.25 | 86.41 |
| CDY20377 | Canola | nucleus | 83.82 | 86.36 |
| CDY47519 | Canola | nucleus | 83.82 | 83.01 |
| CDY64211 | Canola | nucleus, plastid | 82.35 | 81.55 |
| CDY33815 | Canola | nucleus | 28.43 | 50.43 |
| VIT_18s0001g13320.t01 | Wine grape | nucleus | 43.63 | 44.28 |
| KRH61095 | Soybean | nucleus | 52.45 | 43.67 |
| KRH51773 | Soybean | nucleus | 51.96 | 42.57 |
| KRH15125 | Soybean | nucleus | 50.49 | 36.4 |
| KRH05892 | Soybean | nucleus | 50.98 | 36.24 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.31 | 34.65 |
| Solyc04g080910.1.1 | Tomato | nucleus | 41.67 | 34.27 |
| TraesCS2B01G529200.1 | Wheat | plastid | 32.35 | 34.2 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 32.35 | 33.85 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 31.37 | 33.16 |
| PGSC0003DMT400009506 | Potato | nucleus | 41.18 | 32.06 |
| Os08t0565200-01 | Rice | nucleus | 35.78 | 31.74 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 35.29 | 31.3 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 35.29 | 31.03 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 34.8 | 30.74 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 35.29 | 29.03 |
| CDX93190 | Canola | nucleus | 29.41 | 28.17 |
| CDX70820 | Canola | nucleus | 36.27 | 26.43 |
| CDY71905 | Canola | nucleus | 31.37 | 26.23 |
| CDY54455 | Canola | nucleus | 30.39 | 25.1 |
| CDY58117 | Canola | nucleus | 34.31 | 24.22 |
| CDY02629 | Canola | nucleus | 33.82 | 23.96 |
| CDY06088 | Canola | nucleus | 30.88 | 23.33 |
| CDX88955 | Canola | nucleus | 29.41 | 23.08 |
| CDX72012 | Canola | nucleus | 30.88 | 23.08 |
| CDX92610 | Canola | nucleus | 34.31 | 22.88 |
| CDY52095 | Canola | nucleus | 28.43 | 21.8 |
| CDY61527 | Canola | nucleus | 30.88 | 21.43 |
| CDY25420 | Canola | nucleus | 34.31 | 21.34 |
| Zm00001d049889_P001 | Maize | nucleus | 36.27 | 21.02 |
| CDY04950 | Canola | nucleus | 33.33 | 20.99 |
| CDY36289 | Canola | nucleus | 29.9 | 20.96 |
| Zm00001d031861_P001 | Maize | nucleus | 35.78 | 20.33 |
| CDY67039 | Canola | nucleus | 28.92 | 20.21 |
| EER92302 | Sorghum | nucleus | 34.31 | 19.94 |
| CDY00987 | Canola | nucleus | 30.39 | 19.94 |
| CDY52149 | Canola | nucleus | 31.86 | 19.82 |
| CDY08557 | Canola | nucleus | 30.39 | 19.75 |
| CDY52924 | Canola | nucleus | 32.35 | 19.64 |
| CDX70151 | Canola | nucleus | 30.88 | 19.09 |
| CDX98843 | Canola | nucleus | 30.88 | 18.86 |
| OQU80673 | Sorghum | nucleus | 35.78 | 18.81 |
| CDY52427 | Canola | nucleus | 29.41 | 18.58 |
| CDY54991 | Canola | nucleus | 29.9 | 18.1 |
| CDX73896 | Canola | nucleus | 32.84 | 17.54 |
| CDY07614 | Canola | nucleus | 28.43 | 17.26 |
| CDY00719 | Canola | nucleus | 5.88 | 5.06 |
| CDY33814 | Canola | nucleus | 0.98 | 2.3 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078JYM1 | UniProt:A0A078JYM1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY70626 | ProteinID:CDY70626 | ProteinID:CDY70626.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00004859001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF18 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EEAC67 | SEG:seg | : | : | : | : |
Description
BnaCnng69090DBnaCnng69090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYM1]
Coordinates
chrLK042742:-:1190..1804
Molecular Weight (calculated)
22533.9 Da
IEP (calculated)
5.333
GRAVY (calculated)
-0.768
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSIEPKVMM VGANKKQRTV NASSRKGCMR GKGGPENASC TYKGVRQRTW GKWVAEIREP NRGARLWLGT FETSREAALA YDSAARKLYG PDAHLNLPES
101: LRSYPETASP GTQVSQTPSS NTGEKSSEES PSSSNEMSSW GTRSEISWEH MNVDLPVTDD SSIWQEATMS LGFPWVHEGD DDISLFNSCI SDGYSNWDSF
201: HSPL
101: LRSYPETASP GTQVSQTPSS NTGEKSSEES PSSSNEMSSW GTRSEISWEH MNVDLPVTDD SSIWQEATMS LGFPWVHEGD DDISLFNSCI SDGYSNWDSF
201: HSPL
001: MSSIEPKVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPES
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
Arabidopsis Description
DREB2DDehydration-responsive element-binding protein 2D [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.