Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017011.1-P | Field mustard | nucleus | 92.96 | 58.93 |
| CDY52924 | Canola | nucleus | 92.49 | 58.63 |
| AT2G40340.6 | Thale cress | mitochondrion, nucleus, plastid | 67.61 | 41.38 |
| CDY33815 | Canola | nucleus | 22.07 | 40.87 |
| AT2G40350.2 | Thale cress | nucleus | 31.46 | 40.85 |
| KRH22495 | Soybean | nucleus | 32.39 | 34.85 |
| KRH26854 | Soybean | nucleus | 31.92 | 34.52 |
| KRH25441 | Soybean | nucleus | 30.99 | 31.28 |
| KRH56072 | Soybean | nucleus | 30.99 | 30.84 |
| VIT_13s0067g01960.t01 | Wine grape | nucleus | 50.7 | 30.42 |
| CDX68128 | Canola | nucleus | 28.17 | 29.41 |
| CDY70626 | Canola | nucleus | 28.17 | 29.41 |
| CDY20377 | Canola | nucleus | 26.76 | 28.79 |
| CDY39036 | Canola | nucleus | 26.76 | 28.79 |
| CDY47519 | Canola | nucleus | 27.7 | 28.64 |
| Solyc06g050520.1.1 | Tomato | nucleus | 39.44 | 28.0 |
| CDY64211 | Canola | nucleus, plastid | 26.76 | 27.67 |
| PGSC0003DMT400061541 | Potato | nucleus | 40.38 | 26.88 |
| CDY71905 | Canola | nucleus | 29.58 | 25.82 |
| KRH14906 | Soybean | nucleus | 46.48 | 25.19 |
| CDY54455 | Canola | nucleus | 29.11 | 25.1 |
| KRH73245 | Soybean | nucleus | 46.01 | 25.0 |
| CDY67039 | Canola | nucleus | 34.27 | 25.0 |
| CDY36289 | Canola | nucleus | 33.8 | 24.74 |
| CDX98843 | Canola | nucleus | 38.5 | 24.55 |
| CDX70151 | Canola | nucleus | 38.03 | 24.55 |
| CDY52149 | Canola | nucleus | 37.09 | 24.09 |
| CDY08557 | Canola | nucleus | 34.27 | 23.25 |
| CDX70820 | Canola | nucleus | 30.05 | 22.86 |
| CDY04950 | Canola | nucleus | 34.74 | 22.84 |
| CDY00987 | Canola | nucleus | 33.33 | 22.83 |
| Solyc05g052410.1.1 | Tomato | nucleus | 42.72 | 22.81 |
| CDY06088 | Canola | nucleus | 28.64 | 22.59 |
| CDY52095 | Canola | nucleus | 28.17 | 22.56 |
| CDX92610 | Canola | nucleus | 32.39 | 22.55 |
| CDX72012 | Canola | nucleus | 28.64 | 22.34 |
| CDX88955 | Canola | nucleus | 27.23 | 22.31 |
| CDY58117 | Canola | nucleus | 30.05 | 22.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.86 | 21.94 |
| CDY02629 | Canola | nucleus | 29.58 | 21.88 |
| PGSC0003DMT400069733 | Potato | nucleus | 41.31 | 21.52 |
| CDX73896 | Canola | nucleus | 38.5 | 21.47 |
| CDY61527 | Canola | nucleus | 29.58 | 21.43 |
| CDY25420 | Canola | nucleus | 31.92 | 20.73 |
| CDY54991 | Canola | nucleus | 22.54 | 14.24 |
| CDY52427 | Canola | nucleus | 21.6 | 14.24 |
| CDY07614 | Canola | nucleus | 21.6 | 13.69 |
| CDY00719 | Canola | nucleus | 9.39 | 8.44 |
| CDY33814 | Canola | nucleus | 2.82 | 6.9 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078DV16 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDX93190 | ProteinID:CDX93190 | ProteinID:CDX93190.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00155125001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF17 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EECFEA | SEG:seg | : | : |
Description
BnaC04g47060D
Coordinates
chrLK031875:+:203981..204765
Molecular Weight (calculated)
23334.8 Da
IEP (calculated)
4.157
GRAVY (calculated)
-0.541
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGKGGPENG IWNYRGVRQR TWGKWVAEIR QPCRGARLWL GTFPSSYEAA LAYDEAAKAM YGESARLNLP DISNVSSSAA AGSVTTLSNE SEVCALEDTN
101: VKEEDGSDEY GFLKSSQCVK EEMSVLDSAD TFGNGNEHEP WDFCVHEMFD VDEVMGLLDE INVSGQETTL SQDASLLGSL NHTETAHPGV DYGYPIVQPS
201: ERNNTSCVGL DRY
101: VKEEDGSDEY GFLKSSQCVK EEMSVLDSAD TFGNGNEHEP WDFCVHEMFD VDEVMGLLDE INVSGQETTL SQDASLLGSL NHTETAHPGV DYGYPIVQPS
201: ERNNTSCVGL DRY
001: MKGKGGPENG ICDYRGVRQR RWGKWVAEIR EPDGGARLWL GTFSSSYEAA LAYDEAAKAI YGQSARLNLP EITNRSSSTA ATATVSGSVT AFSDESEVCA
101: REDTNASSGF GQVKLEDCSD EYVLLDSSQC IKEELKGKEE VREEHNLAVG FGIGQDSKRE TLDAWLMGNG NEQEPLEFGV DETFDINELL GILNDNNVSG
201: QETMQYQVDR HPNFSYQTQF PNSNLLGSLN PMEIAQPGVD YGCPYVQPSD MENYGIDLDH RRFNDLDIQD LDFGGDKDVH GST
101: REDTNASSGF GQVKLEDCSD EYVLLDSSQC IKEELKGKEE VREEHNLAVG FGIGQDSKRE TLDAWLMGNG NEQEPLEFGV DETFDINELL GILNDNNVSG
201: QETMQYQVDR HPNFSYQTQF PNSNLLGSLN PMEIAQPGVD YGCPYVQPSD MENYGIDLDH RRFNDLDIQD LDFGGDKDVH GST
Arabidopsis Description
DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.