Factsheet for PGSC0003DMT400061541

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g050520.1.1	Tomato	nucleus	78.44	83.67
AT2G40350.2	Thale cress	nucleus	26.25	51.22
KRH22495	Soybean	nucleus	31.56	51.01
KRH26854	Soybean	nucleus	31.25	50.76
PGSC0003DMT400041067	Potato	nucleus	18.12	49.15
KRH56072	Soybean	nucleus	31.88	47.66
KRH25441	Soybean	nucleus	31.25	47.39
PGSC0003DMT400069733	Potato	nucleus	59.38	46.45
CDX93190	Canola	nucleus	26.88	40.38
VIT_13s0067g01960.t01	Wine grape	nucleus	43.44	39.15
PGSC0003DMT400073853	Potato	nucleus	19.69	39.13
KRH73245	Soybean	nucleus	46.56	38.01
KRH14906	Soybean	nucleus	46.56	37.91
CDY52924	Canola	nucleus	35.62	33.93
Bra017011.1-P	Field mustard	nucleus	35.31	33.63
AT2G40340.6	Thale cress	mitochondrion, nucleus, plastid	36.25	33.33
GSMUA_Achr9P04630_001	Banana	nucleus	29.06	31.31
GSMUA_Achr11P...	Banana	nucleus	27.19	31.18
GSMUA_Achr5P28050_001	Banana	nucleus	23.12	27.82
GSMUA_Achr6P32780_001	Banana	nucleus	32.5	25.3
PGSC0003DMT400009506	Potato	nucleus	19.38	23.66
PGSC0003DMT400060970	Potato	nucleus	23.12	23.64
PGSC0003DMT400041064	Potato	nucleus	29.38	20.57
PGSC0003DMT400085168	Potato	nucleus	17.81	19.66
PGSC0003DMT400041065	Potato	nucleus	25.94	18.95
PGSC0003DMT400092312	Potato	nucleus	17.5	17.83

Protein Annotations

EntrezGene:102579651	MapMan:15.5.7.2	Gene3D:3.30.730.10	ProteinID:AEI98833	ProteinID:AEI98833.1	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EMBL:HM641796	InterPro:IPR001471	InterPro:IPR036955	UniProt:M1C7N5	PFAM:PF00847	EnsemblPlantsGene:PGSC0003DMG401023951
PGSC:PGSC0003DMG401023951	EnsemblPlants:PGSC0003DMT400061541	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF2
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295A1B6	RefSeq:XP_006353419.1	SEG:seg	:

Description

Dehydration responsive element binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG401023951]

Coordinates

chr6:-:30401091..30403179

Molecular Weight (calculated)

35127.8 Da

IEP (calculated)

4.381

GRAVY (calculated)

-0.705

Length

320 amino acids

Sequence
(BLAST)

001: MAIMDQAANM ATLPLDYSGK RKSRSRRDRT KNVEERLAKW KEYNEKLDSV DDEGKPVRKV PAKGSKKGCM RGKGGPENSR CKYRGVRQRI WGKWVAEIRE
101: PKRGSRLWLG TFGTAIEAAL AYDEAARAMY GPCARLNLPN YPSRDDSDSA SWATTSASDC TVASGGFGGE VCPGEGATTA AGTPLSSVKD EGKDETAGLP
201: GEMEIVEPTS IDQDTLKSGW DCLDNLNLDE MFDVDELLAM LDSTPVSTND FGSDGKQYAY DNNLLSNSPC QPLGDPQEMG QEAPMTFDYA FDFLKPGRQE
301: DLNFNSDDLT FMDLDSELVV

Best Arabidopsis Sequence Match ( AT2G40340.3 )
(BLAST)

001: MPSEIVDRKR KSRGTRDVAE ILRQWREYNE QIEAESCIDG GGPKSIRKPP PKGSRKGCMK GKGGPENGIC DYRGVRQRRW GKWVAEIREP DGGARLWLGT
101: FSSSYEAALA YDEAAKAIYG QSARLNLPEI TNRSSSTAAT ATVSGSVTAF SDESEVCARE DTNASSGFGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD
201: INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST

Arabidopsis Description

DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.