Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017011.1-P | Field mustard | nucleus | 98.81 | 98.81 |
| CDX93190 | Canola | nucleus | 58.63 | 92.49 |
| AT2G40350.2 | Thale cress | nucleus | 30.65 | 62.8 |
| AT2G40340.6 | Thale cress | mitochondrion, nucleus, plastid | 53.87 | 52.01 |
| KRH22495 | Soybean | nucleus | 26.79 | 45.45 |
| KRH26854 | Soybean | nucleus | 26.19 | 44.67 |
| CDY33815 | Canola | nucleus | 14.88 | 43.48 |
| KRH25441 | Soybean | nucleus | 26.19 | 41.71 |
| KRH56072 | Soybean | nucleus | 26.19 | 41.12 |
| Solyc06g050520.1.1 | Tomato | nucleus | 33.93 | 38.0 |
| VIT_13s0067g01960.t01 | Wine grape | nucleus | 39.58 | 37.46 |
| PGSC0003DMT400061541 | Potato | nucleus | 33.93 | 35.62 |
| CDY36289 | Canola | nucleus | 29.76 | 34.36 |
| CDY67039 | Canola | nucleus | 29.17 | 33.56 |
| KRH14906 | Soybean | nucleus | 38.99 | 33.33 |
| CDY52149 | Canola | nucleus | 32.44 | 33.23 |
| KRH73245 | Soybean | nucleus | 38.69 | 33.16 |
| CDY00987 | Canola | nucleus | 30.06 | 32.48 |
| CDX68128 | Canola | nucleus | 19.64 | 32.35 |
| CDY70626 | Canola | nucleus | 19.64 | 32.35 |
| CDY08557 | Canola | nucleus | 30.06 | 32.17 |
| CDY47519 | Canola | nucleus | 19.64 | 32.04 |
| CDX98843 | Canola | nucleus | 31.85 | 32.04 |
| CDY71905 | Canola | nucleus | 23.21 | 31.97 |
| CDY39036 | Canola | nucleus | 18.75 | 31.82 |
| CDY04950 | Canola | nucleus | 30.65 | 31.79 |
| CDY20377 | Canola | nucleus | 18.45 | 31.31 |
| CDX70151 | Canola | nucleus | 30.65 | 31.21 |
| CDY64211 | Canola | nucleus, plastid | 19.05 | 31.07 |
| CDY54455 | Canola | nucleus | 22.32 | 30.36 |
| Solyc05g052410.1.1 | Tomato | nucleus | 36.01 | 30.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.98 | 29.47 |
| PGSC0003DMT400069733 | Potato | nucleus | 35.42 | 29.1 |
| CDY61527 | Canola | nucleus | 23.21 | 26.53 |
| CDX73896 | Canola | nucleus | 30.06 | 26.44 |
| CDX70820 | Canola | nucleus | 20.54 | 24.64 |
| CDY06088 | Canola | nucleus | 19.64 | 24.44 |
| CDX92610 | Canola | nucleus | 22.02 | 24.18 |
| CDX72012 | Canola | nucleus | 19.64 | 24.18 |
| CDY52095 | Canola | nucleus | 19.05 | 24.06 |
| CDY58117 | Canola | nucleus | 20.54 | 23.88 |
| CDX88955 | Canola | nucleus | 18.45 | 23.85 |
| CDY02629 | Canola | nucleus | 20.24 | 23.61 |
| CDY25420 | Canola | nucleus | 21.73 | 22.26 |
| CDY54991 | Canola | nucleus | 15.77 | 15.73 |
| CDY52427 | Canola | nucleus | 14.58 | 15.17 |
| CDY07614 | Canola | nucleus | 14.58 | 14.58 |
| CDY00719 | Canola | nucleus | 6.85 | 9.7 |
| CDY33814 | Canola | nucleus | 1.79 | 6.9 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078ITZ5 | UniProt:A0A078ITZ5 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY52924 | ProteinID:CDY52924 | ProteinID:CDY52924.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00008106001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF17 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE4605 | SEG:seg | : | : | : | : |
Description
BnaA04g29310DBnaA04g29310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITZ5]
Coordinates
chrLK033142:-:24698..26502
Molecular Weight (calculated)
37364.9 Da
IEP (calculated)
4.665
GRAVY (calculated)
-0.477
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLHLWFRIL VKEKTLAEKI ETFFSFFPET VLMFFTGHEF VQMGLVKEKT LAEKIVTFLS FFPETALAMR KRKSRDGATS VAETLNKWRE DNEITEAASR
101: NDDGCLKPKP IRKAPPKGSR KGCMKGKGGP ENGIWNYRGV RQRTWGKWVA EIRQPCRGAR LWLGTFPSSY EAALAYDEAA KAMYGEAARL NLPDISNVSS
201: LTTAAGSVTT LSNESEVCAL EDTNVKEEDG GDEYGFVKSS QCVKEEMGVP DSADTFGYGN EHEAWDFGVD EMFDVDEVMG LLDEINVSGQ ETTQSQDASL
301: LGSLNHMETA HPGVDCGYPI VQPSERNNSC VDLDRY
101: NDDGCLKPKP IRKAPPKGSR KGCMKGKGGP ENGIWNYRGV RQRTWGKWVA EIRQPCRGAR LWLGTFPSSY EAALAYDEAA KAMYGEAARL NLPDISNVSS
201: LTTAAGSVTT LSNESEVCAL EDTNVKEEDG GDEYGFVKSS QCVKEEMGVP DSADTFGYGN EHEAWDFGVD EMFDVDEVMG LLDEINVSGQ ETTQSQDASL
301: LGSLNHMETA HPGVDCGYPI VQPSERNNSC VDLDRY
001: MKTSSCSYFG VITFRKRKSR GTRDVAEILR QWREYNEQIE AESCIDGGGP KSIRKPPPKG SRKGCMKGKG GPENGICDYR GVRQRRWGKW VAEIREPDGG
101: ARLWLGTFSS SYEAALAYDE AAKAIYGQSA RLNLPEITNR SSSTAATATV SGSVTAFSDE SEVCAREDTN ASSGFGQVKL EDCSDEYVLL DSSQCIKEEL
201: KGKEEVREEH NLAVGFGIGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA
301: QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST
101: ARLWLGTFSS SYEAALAYDE AAKAIYGQSA RLNLPEITNR SSSTAATATV SGSVTAFSDE SEVCAREDTN ASSGFGQVKL EDCSDEYVLL DSSQCIKEEL
201: KGKEEVREEH NLAVGFGIGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA
301: QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST
Arabidopsis Description
DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [plastid,nucleus,mitochondrion]
SUBAcon: [plastid,nucleus,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.