Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07614 | Canola | nucleus | 93.5 | 89.88 |
| CDY54991 | Canola | nucleus | 81.11 | 77.74 |
| AT2G40220.1 | Thale cress | nucleus | 77.09 | 75.91 |
| CDY33815 | Canola | nucleus | 17.34 | 48.7 |
| VIT_13s0067g01400.t01 | Wine grape | nucleus | 43.03 | 45.42 |
| GSMUA_Achr9P18060_001 | Banana | nucleus | 32.51 | 40.86 |
| GSMUA_Achr5P07400_001 | Banana | nucleus | 36.53 | 40.41 |
| KRH73281 | Soybean | nucleus, plastid | 41.18 | 39.35 |
| PGSC0003DMT400085168 | Potato | nucleus | 35.29 | 39.31 |
| Zm00001d038001_P001 | Maize | nucleus | 29.72 | 38.71 |
| GSMUA_Achr3P10100_001 | Banana | nucleus | 33.75 | 38.65 |
| KRH14926 | Soybean | nucleus | 38.39 | 38.39 |
| TraesCS1D01G225000.1 | Wheat | plastid | 30.34 | 38.13 |
| KXG21759 | Sorghum | nucleus | 30.34 | 38.13 |
| TraesCS1B01G236700.1 | Wheat | nucleus | 30.03 | 37.89 |
| TraesCS1A01G223400.1 | Wheat | nucleus | 30.34 | 37.69 |
| Os05t0351200-00 | Rice | nucleus | 30.65 | 36.8 |
| PGSC0003DMT400092312 | Potato | nucleus | 35.29 | 36.31 |
| CDY39036 | Canola | nucleus | 19.2 | 31.31 |
| HORVU1Hr1G060060.1 | Barley | nucleus, plastid | 29.72 | 31.27 |
| CDY20377 | Canola | nucleus | 18.58 | 30.3 |
| CDY70626 | Canola | nucleus | 18.58 | 29.41 |
| CDY64211 | Canola | nucleus, plastid | 18.58 | 29.13 |
| CDY47519 | Canola | nucleus | 18.58 | 29.13 |
| CDX68128 | Canola | nucleus | 18.27 | 28.92 |
| CDX88955 | Canola | nucleus | 20.12 | 25.0 |
| CDY06088 | Canola | nucleus | 20.74 | 24.81 |
| CDY52095 | Canola | nucleus | 20.43 | 24.81 |
| CDX72012 | Canola | nucleus | 20.74 | 24.54 |
| CDY71905 | Canola | nucleus | 17.96 | 23.77 |
| CDY54455 | Canola | nucleus | 17.96 | 23.48 |
| CDX70820 | Canola | nucleus | 19.81 | 22.86 |
| CDY58117 | Canola | nucleus | 20.12 | 22.49 |
| CDY02629 | Canola | nucleus | 19.81 | 22.22 |
| CDX93190 | Canola | nucleus | 14.24 | 21.6 |
| CDX92610 | Canola | nucleus | 20.12 | 21.24 |
| CDY25420 | Canola | nucleus | 20.43 | 20.12 |
| CDY67039 | Canola | nucleus | 17.96 | 19.86 |
| CDY36289 | Canola | nucleus | 17.65 | 19.59 |
| CDY61527 | Canola | nucleus | 17.65 | 19.39 |
| CDY00987 | Canola | nucleus | 17.65 | 18.33 |
| CDY08557 | Canola | nucleus | 17.65 | 18.15 |
| CDY04950 | Canola | nucleus | 17.96 | 17.9 |
| CDY52149 | Canola | nucleus | 17.96 | 17.68 |
| CDX98843 | Canola | nucleus | 17.96 | 17.37 |
| CDX70151 | Canola | nucleus | 17.65 | 17.27 |
| CDX73896 | Canola | nucleus | 20.12 | 17.02 |
| CDY52924 | Canola | nucleus | 15.17 | 14.58 |
| CDY00719 | Canola | nucleus | 3.72 | 5.06 |
| CDY33814 | Canola | nucleus | 0.93 | 3.45 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078IR31 | UniProt:A0A078IR31 | InterPro:ABI4 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY52427 | ProteinID:CDY52427 | ProteinID:CDY52427.1 | InterPro:DNA-bd_dom_sf | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0048316 | EnsemblPlantsGene:GSBRNA2T00006958001 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 |
| PANTHER:PTHR31241:SF7 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EADC72 | SEG:seg | : |
Description
BnaC03g72510DBnaC03g72510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IR31]
Coordinates
chrLK033086:-:2636..3607
Molecular Weight (calculated)
34980.0 Da
IEP (calculated)
7.015
GRAVY (calculated)
-0.724
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPLPSQQQQ HNLDDNIQQT LTHNPQTDST DSTSSGQQRK RKGKGGPDNS KFRYRGVRQR SWGKWVAEIR EPRKRTRKWL GTFATAEDAA RAYDRAAVFL
101: YGSRAQLNLS PSSPSSVSSS SSTVSAASSS PSSSSSSTQT LRPLLPRPSA ASSASAFGHY GVPFTNNIFL SGGTSMSCPS YGLLPHQQQQ PNQMTQVGQF
201: HHQPYQNLHS CDNNNKMGDV ELTDAPVANS TSFRHEAALG QEQGGSACNN TNYLMENMNS LTGSVGSSLS ISTAVNPVSS MGMDPGYNMV GDGSATGWPF
301: GGEDEYSHWG SMWDFVDPFL LDF
101: YGSRAQLNLS PSSPSSVSSS SSTVSAASSS PSSSSSSTQT LRPLLPRPSA ASSASAFGHY GVPFTNNIFL SGGTSMSCPS YGLLPHQQQQ PNQMTQVGQF
201: HHQPYQNLHS CDNNNKMGDV ELTDAPVANS TSFRHEAALG QEQGGSACNN TNYLMENMNS LTGSVGSSLS ISTAVNPVSS MGMDPGYNMV GDGSATGWPF
301: GGEDEYSHWG SMWDFVDPFL LDF
001: MDPLASQHQH NHLEDNNQTL THNNPQSDST TDSSTSSAQR KRKGKGGPDN SKFRYRGVRQ RSWGKWVAEI REPRKRTRKW LGTFATAEDA ARAYDRAAVY
101: LYGSRAQLNL TPSSPSSVSS SSSSVSAASS PSTSSSSTQT LRPLLPRPAA ATVGGGANFG PYGIPFNNNI FLNGGTSMLC PSYGFFPQQQ QQQNQMVQMG
201: QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA LGQEQGGSGC NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI
301: WPFGGEEEYS HNWGSIWDFI DPILGEFY
101: LYGSRAQLNL TPSSPSSVSS SSSSVSAASS PSTSSSSTQT LRPLLPRPAA ATVGGGANFG PYGIPFNNNI FLNGGTSMLC PSYGFFPQQQ QQQNQMVQMG
201: QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA LGQEQGGSGC NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI
301: WPFGGEEEYS HNWGSIWDFI DPILGEFY
Arabidopsis Description
ABI4Ethylene-responsive transcription factor ABI4 [Source:UniProtKB/Swiss-Prot;Acc:A0MES8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.