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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400085168 Potato nucleus 46.08 48.62
PGSC0003DMT400092312 Potato nucleus 46.73 45.54
KRH73281 Soybean nucleus, plastid 49.02 44.38
GSMUA_Achr5P07400_001 Banana nucleus 41.18 43.15
CDY52427 Canola nucleus 45.42 43.03
KRH14926 Soybean nucleus 45.42 43.03
AT2G40220.1 Thale cress nucleus 46.08 42.99
Bra004978.1-P Field mustard nucleus 43.46 41.96
GSMUA_Achr3P10100_001 Banana nucleus 38.56 41.84
GSMUA_Achr9P18060_001 Banana nucleus 34.97 41.63
Zm00001d038001_P001 Maize nucleus 33.01 40.73
CDY07614 Canola nucleus 44.44 40.48
Bra000178.1-P Field mustard nucleus 44.44 40.48
TraesCS1D01G225000.1 Wheat plastid 33.99 40.47
CDY54991 Canola nucleus 44.44 40.36
TraesCS1B01G236700.1 Wheat nucleus 33.66 40.23
KXG21759 Sorghum nucleus 33.66 40.08
TraesCS1A01G223400.1 Wheat nucleus 33.33 39.23
Os05t0351200-00 Rice nucleus 33.66 38.29
HORVU1Hr1G060060.1 Barley nucleus, plastid 33.66 33.55
VIT_18s0001g13320.t01 Wine grape nucleus 17.97 27.36
VIT_08s0007g08150.t01 Wine grape nucleus 22.22 23.69
VIT_13s0067g01960.t01 Wine grape nucleus 21.24 18.31
Protein Annotations
EntrezGene:104881092MapMan:15.5.7.2Gene3D:3.30.730.10InterPro:ABI4InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sf
ProteinID:CCB49849ProteinID:CCB49849.1InterPro:DNA-bd_dom_sfUniProt:F6HCB1EMBL:FN595514GO:GO:0000003
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0006629GO:GO:0006950GO:GO:0006970GO:GO:0007154GO:GO:0007165GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009414GO:GO:0009628
GO:GO:0009719GO:GO:0009738GO:GO:0009744GO:GO:0009749GO:GO:0009791GO:GO:0009987
GO:GO:0010119GO:GO:0010353GO:GO:0010449GO:GO:0010896GO:GO:0031930GO:GO:0032880
GO:GO:0040007GO:GO:0043565GO:GO:0044212GO:GO:0045893GO:GO:0048316GO:GO:0048527
InterPro:IPR001471InterPro:IPR036955PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31241
PANTHER:PTHR31241:SF7SMART:SM00380SUPFAM:SSF54171UniParc:UPI0002107F0AArrayExpress:VIT_13s0067g01400EnsemblPlantsGene:VIT_13s0067g01400
EnsemblPlants:VIT_13s0067g01400.t01RefSeq:XP_010658253.1SEG:seg:::
Description
No Description!
Coordinates
chr13:-:792365..793285
Molecular Weight (calculated)
32902.7 Da
IEP (calculated)
7.131
GRAVY (calculated)
-0.693
Length
306 amino acids
Sequence
(BLAST)
001: MDCEDQDTKP ITTTTTSNET NSSNSSSATA GATSCGGDNG SNGNSRKCKG KGGPDNSKFK YRGVRQRSWG KWVAEIREPR KRTRKWLGTF ATAEDAARAY
101: DRAAIILYGS RAQLNLQPSV SSASSSSRGS SSSSSGTQTL RPLLPRPSGF GLTFSSPSAT PHTAGGYVPY GFSHGMDSSV LCGNVVQSQQ QLVQQQHQLL
201: YPPSDMNVAA DPITTATITT YPNPNHHHHH HHHHPYQQNC LYDEINSLVG SVGPSLSLSS QPGVAPAQPD QALSVGLGSP SLWPLNDEDE YPPSCIWDYG
301: DPFFDF
Best Arabidopsis Sequence Match ( AT2G40220.1 )
(BLAST)
001: MDPLASQHQH NHLEDNNQTL THNNPQSDST TDSSTSSAQR KRKGKGGPDN SKFRYRGVRQ RSWGKWVAEI REPRKRTRKW LGTFATAEDA ARAYDRAAVY
101: LYGSRAQLNL TPSSPSSVSS SSSSVSAASS PSTSSSSTQT LRPLLPRPAA ATVGGGANFG PYGIPFNNNI FLNGGTSMLC PSYGFFPQQQ QQQNQMVQMG
201: QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA LGQEQGGSGC NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI
301: WPFGGEEEYS HNWGSIWDFI DPILGEFY
Arabidopsis Description
ABI4Ethylene-responsive transcription factor ABI4 [Source:UniProtKB/Swiss-Prot;Acc:A0MES8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.