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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 2
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G225000.1 Wheat plastid 96.48 96.11
TraesCS1A01G223400.1 Wheat nucleus 95.31 93.85
HORVU1Hr1G060060.1 Barley nucleus, plastid 92.58 77.2
KXG21759 Sorghum nucleus 61.33 61.09
Zm00001d038001_P001 Maize nucleus 58.2 60.08
Os05t0351200-00 Rice nucleus 58.98 56.13
GSMUA_Achr3P10100_001 Banana nucleus 42.58 38.65
GSMUA_Achr9P18060_001 Banana nucleus 37.5 37.35
GSMUA_Achr5P07400_001 Banana nucleus 41.41 36.3
VIT_13s0067g01400.t01 Wine grape nucleus 40.23 33.66
CDY52427 Canola nucleus 37.89 30.03
PGSC0003DMT400085168 Potato nucleus 33.98 30.0
KRH73281 Soybean nucleus, plastid 39.06 29.59
TraesCS2B01G529200.1 Wheat plastid 22.27 29.53
AT2G40220.1 Thale cress nucleus 37.5 29.27
Bra004978.1-P Field mustard nucleus 35.94 29.02
Bra000178.1-P Field mustard nucleus 36.72 27.98
CDY07614 Canola nucleus 36.72 27.98
CDY54991 Canola nucleus 36.72 27.89
KRH14926 Soybean nucleus 35.16 27.86
PGSC0003DMT400092312 Potato nucleus 33.98 27.71
TraesCS1B01G256000.1 Wheat nucleus 23.44 26.09
TraesCS4B01G290100.1 Wheat nucleus 25.0 20.32
TraesCS1B01G307000.1 Wheat nucleus 22.27 14.81
TraesCS1B01G235100.2 Wheat nucleus 21.48 14.18
Protein Annotations
MapMan:15.5.7.2Gene3D:3.30.730.10InterPro:ABI4InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sf
GO:GO:0000003GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006355
GO:GO:0007154GO:GO:0007165GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009719GO:GO:0009738GO:GO:0009791GO:GO:0009987GO:GO:0048316InterPro:IPR001471
InterPro:IPR036955PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31241PANTHER:PTHR31241:SF7
SMART:SM00380SUPFAM:SSF54171EnsemblPlantsGene:TraesCS1B01G236700EnsemblPlants:TraesCS1B01G236700.1TIGR:cd00018SEG:seg
Description
No Description!
Coordinates
chr1B:+:423823534..423824304
Molecular Weight (calculated)
27118.6 Da
IEP (calculated)
9.516
GRAVY (calculated)
-0.532
Length
256 amino acids
Sequence
(BLAST)
001: MEHKPNPAVL TATTTEAASS SDVGSSVSSG GRKGKAAGKG GPENAKFRYR GVRQRSWGKW VAEIREPRKR SRKWLGTFAT AEDAARAYDR AALLLYGPRA
101: HLNLTAPPPL APGADPHPRP LGSSASSSSS SAPPPLRPLL PRPPQNSGGA GAVFQHHHHQ YRFLPLRVTP PSTSPPLYYA STATASTVTT TVAPPHETTA
201: PLPVASSSTM AAQDGAPAGA AEAEVTPEWY LAAEEEDYEA ALLWNEPDPL FDIFSK
Best Arabidopsis Sequence Match ( AT2G40220.1 )
(BLAST)
001: MDPLASQHQH NHLEDNNQTL THNNPQSDST TDSSTSSAQR KRKGKGGPDN SKFRYRGVRQ RSWGKWVAEI REPRKRTRKW LGTFATAEDA ARAYDRAAVY
101: LYGSRAQLNL TPSSPSSVSS SSSSVSAASS PSTSSSSTQT LRPLLPRPAA ATVGGGANFG PYGIPFNNNI FLNGGTSMLC PSYGFFPQQQ QQQNQMVQMG
201: QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA LGQEQGGSGC NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI
301: WPFGGEEEYS HNWGSIWDFI DPILGEFY
Arabidopsis Description
ABI4Ethylene-responsive transcription factor ABI4 [Source:UniProtKB/Swiss-Prot;Acc:A0MES8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.