Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52427 | Canola | nucleus | 75.91 | 77.09 |
| Bra004978.1-P | Field mustard | nucleus | 73.78 | 76.34 |
| CDY07614 | Canola | nucleus | 75.61 | 73.81 |
| Bra000178.1-P | Field mustard | nucleus | 75.61 | 73.81 |
| CDY54991 | Canola | nucleus | 73.17 | 71.22 |
| VIT_13s0067g01400.t01 | Wine grape | nucleus | 42.99 | 46.08 |
| Zm00001d038001_P001 | Maize | nucleus | 30.18 | 39.92 |
| GSMUA_Achr5P07400_001 | Banana | nucleus | 35.06 | 39.38 |
| KXG21759 | Sorghum | nucleus | 30.79 | 39.3 |
| GSMUA_Achr9P18060_001 | Banana | nucleus | 30.49 | 38.91 |
| KRH73281 | Soybean | nucleus, plastid | 39.94 | 38.76 |
| KRH14926 | Soybean | nucleus | 38.11 | 38.7 |
| PGSC0003DMT400085168 | Potato | nucleus | 33.84 | 38.28 |
| GSMUA_Achr3P10100_001 | Banana | nucleus | 32.62 | 37.94 |
| TraesCS1D01G225000.1 | Wheat | plastid | 29.57 | 37.74 |
| TraesCS1A01G223400.1 | Wheat | nucleus | 29.88 | 37.69 |
| TraesCS1B01G236700.1 | Wheat | nucleus | 29.27 | 37.5 |
| PGSC0003DMT400092312 | Potato | nucleus | 35.06 | 36.62 |
| Os05t0351200-00 | Rice | nucleus | 29.88 | 36.43 |
| HORVU1Hr1G060060.1 | Barley | nucleus, plastid | 29.88 | 31.92 |
| AT1G75490.1 | Thale cress | nucleus | 18.9 | 30.1 |
| AT2G40350.2 | Thale cress | nucleus | 13.72 | 27.44 |
| AT3G57600.1 | Thale cress | nucleus | 19.51 | 23.1 |
| AT2G38340.1 | Thale cress | nucleus | 16.16 | 21.72 |
| AT5G18450.1 | Thale cress | nucleus | 19.82 | 21.17 |
| AT3G11020.1 | Thale cress | nucleus | 19.51 | 19.39 |
| AT5G05410.1 | Thale cress | nucleus | 17.68 | 17.31 |
| AT2G40340.6 | Thale cress | mitochondrion, nucleus, plastid | 16.16 | 15.23 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:818614 | UniProt:A0MES8 | ProteinID:AAC39489.1 | ProteinID:AAD25937.1 |
| InterPro:ABI4 | Symbol:ABI4 | ProteinID:AEC09798.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT2G40220 |
| EnsemblPlantsGene:AT2G40220 | RefSeq:AT2G40220 | TAIR:AT2G40220 | RefSeq:AT2G40220-TAIR-G | EnsemblPlants:AT2G40220.1 | TAIR:AT2G40220.1 |
| EMBL:AY560890 | InterPro:DNA-bd_dom_sf | EMBL:DQ446612 | EMBL:DQ653050 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005975 | GO:GO:0005983 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006629 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0006970 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009744 |
| GO:GO:0009749 | GO:GO:0009791 | GO:GO:0009873 | GO:GO:0009987 | GO:GO:0010119 | GO:GO:0010182 |
| GO:GO:0010353 | GO:GO:0010449 | GO:GO:0010896 | GO:GO:0031930 | GO:GO:0032880 | GO:GO:0040007 |
| GO:GO:0044212 | GO:GO:0045893 | GO:GO:0048316 | GO:GO:0048527 | InterPro:IPR001471 | InterPro:IPR036955 |
| RefSeq:NP_181551.1 | PFAM:PF00847 | PO:PO:0000025 | PO:PO:0007131 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0020149 | PO:PO:0025374 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31241 | PANTHER:PTHR31241:SF7 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000003BE09 | SEG:seg |
Description
ABI4Ethylene-responsive transcription factor ABI4 [Source:UniProtKB/Swiss-Prot;Acc:A0MES8]
Coordinates
chr2:-:16796247..16797585
Molecular Weight (calculated)
35672.9 Da
IEP (calculated)
6.676
GRAVY (calculated)
-0.716
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPLASQHQH NHLEDNNQTL THNNPQSDST TDSSTSSAQR KRKGKGGPDN SKFRYRGVRQ RSWGKWVAEI REPRKRTRKW LGTFATAEDA ARAYDRAAVY
101: LYGSRAQLNL TPSSPSSVSS SSSSVSAASS PSTSSSSTQT LRPLLPRPAA ATVGGGANFG PYGIPFNNNI FLNGGTSMLC PSYGFFPQQQ QQQNQMVQMG
201: QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA LGQEQGGSGC NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI
301: WPFGGEEEYS HNWGSIWDFI DPILGEFY
101: LYGSRAQLNL TPSSPSSVSS SSSSVSAASS PSTSSSSTQT LRPLLPRPAA ATVGGGANFG PYGIPFNNNI FLNGGTSMLC PSYGFFPQQQ QQQNQMVQMG
201: QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA LGQEQGGSGC NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI
301: WPFGGEEEYS HNWGSIWDFI DPILGEFY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.