Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G40350.2 | Thale cress | nucleus | 33.91 | 71.95 |
| CDX93190 | Canola | nucleus | 41.38 | 67.61 |
| Bra017011.1-P | Field mustard | nucleus | 52.3 | 54.17 |
| CDY52924 | Canola | nucleus | 52.01 | 53.87 |
| KRH22495 | Soybean | nucleus | 25.29 | 44.44 |
| KRH26854 | Soybean | nucleus | 25.0 | 44.16 |
| KRH25441 | Soybean | nucleus | 24.43 | 40.28 |
| KRH56072 | Soybean | nucleus | 24.14 | 39.25 |
| Solyc06g050520.1.1 | Tomato | nucleus | 31.61 | 36.67 |
| VIT_13s0067g01960.t01 | Wine grape | nucleus | 37.36 | 36.62 |
| KRH14906 | Soybean | nucleus | 41.09 | 36.39 |
| PGSC0003DMT400061541 | Potato | nucleus | 33.33 | 36.25 |
| KRH73245 | Soybean | nucleus | 40.8 | 36.22 |
| AT5G05410.1 | Thale cress | nucleus | 32.18 | 33.43 |
| AT3G11020.1 | Thale cress | nucleus | 30.75 | 32.42 |
| AT1G75490.1 | Thale cress | nucleus | 18.68 | 31.55 |
| Solyc05g052410.1.1 | Tomato | nucleus | 33.91 | 29.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.44 | 28.84 |
| PGSC0003DMT400069733 | Potato | nucleus | 33.33 | 28.36 |
| AT2G38340.1 | Thale cress | nucleus | 19.83 | 28.28 |
| AT3G57600.1 | Thale cress | nucleus | 21.55 | 27.08 |
| AT5G18450.1 | Thale cress | nucleus | 20.4 | 23.13 |
| AT2G40220.1 | Thale cress | nucleus | 15.23 | 16.16 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:818627 | UniProt:A0A1P8B2B1 | ProteinID:ANM63037.1 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | ArrayExpress:AT2G40340 | EnsemblPlantsGene:AT2G40340 | RefSeq:AT2G40340 | TAIR:AT2G40340 | RefSeq:AT2G40340-TAIR-G |
| EnsemblPlants:AT2G40340.6 | InterPro:DNA-bd_dom_sf | Symbol:DREB2C | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_001325153.1 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF17 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0008488385 |
| SEG:seg | : | : | : | : | : |
Description
DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
Coordinates
chr2:-:16848389..16850487
Molecular Weight (calculated)
38612.6 Da
IEP (calculated)
4.505
GRAVY (calculated)
-0.736
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTSSCSYFG VITFRKRKSR GTRDVAEILR QWREYNEQIE AESCIDGGGP KSIRKPPPKG SRKGCMKGKG GPENGICDYR GVRQRRWGKW VAEIREPDGG
101: ARLWLGTFSS SYEAALAYDE AAKAIYGQSA RLNLPEITNR SSSTAATATV SGSVTAFSDE SEVCAREDTN ASSGFGQVKL EDCSDEYVLL DSSQCIKEEL
201: KGKEEVREEH NLAVGFGIGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA
301: QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST
101: ARLWLGTFSS SYEAALAYDE AAKAIYGQSA RLNLPEITNR SSSTAATATV SGSVTAFSDE SEVCAREDTN ASSGFGQVKL EDCSDEYVLL DSSQCIKEEL
201: KGKEEVREEH NLAVGFGIGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA
301: QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.