Factsheet for GSMUA_AchrUn_randomP14580_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G40350.2	Thale cress	nucleus	23.2	45.12
GSMUA_AchrUn_...	Banana	nucleus	25.08	39.6
GSMUA_Achr3P00320_001	Banana	nucleus	22.88	37.44
CDX93190	Canola	nucleus	21.94	32.86
GSMUA_Achr11P...	Banana	nucleus	28.21	32.26
GSMUA_Achr9P04630_001	Banana	nucleus	28.53	30.64
Bra017011.1-P	Field mustard	nucleus	29.47	27.98
CDY52924	Canola	nucleus	29.47	27.98
GSMUA_Achr5P28050_001	Banana	nucleus	22.88	27.44
AT2G40340.6	Thale cress	mitochondrion, nucleus, plastid	28.84	26.44
GSMUA_Achr6P32780_001	Banana	nucleus	33.54	26.03
GSMUA_Achr9P18060_001	Banana	nucleus	19.44	24.12
GSMUA_Achr3P10100_001	Banana	nucleus	20.38	23.05
GSMUA_Achr3P29800_001	Banana	mitochondrion	13.17	22.34
GSMUA_Achr5P07400_001	Banana	nucleus	20.38	22.26
GSMUA_Achr7P27150_001	Banana	nucleus	14.11	17.31

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_AchrUn_randomG14580_001	EnsemblPlants:GSMUA_AchrUn_randomP14580_001	EnsemblPlants:GSMUA_AchrUn_randomT14580_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0U967	PFAM:PF00847	PFAM:PF01190	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF16	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295E7F6
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG14580_001]

Coordinates

chrchrUn_random:+:68478416..68483055

Molecular Weight (calculated)

35252.1 Da

IEP (calculated)

7.704

GRAVY (calculated)

-0.763

Length

319 amino acids

Sequence
(BLAST)

001: MAMEQERKKR QPRRGHDGPN SVAETIARWR EHNGQLDADN CVRRAPAKGS KKGCMKGKGG PDNPNCQYRG VRQRTWGKWV AEIREPNRGN RLWLGTFPTA
101: LEAAVAYDEA ARAMYGPYAR LNLPERYGDS QLGATNGSCE SCMTSHQSHS DVGISSSGET EVIPKIEKTD ERDNGLSSSG NHKIEHSQPG YWNEDFPIDE
201: IFLEALRLPA ARVGITCKDH RGRVVLYRAA TADDNGYVFA ELYTTTMRGG YFDPAESCAV RLLVSPDDRC SSVTDVNGGD RGTPLRYQNT TIPGQYADLD
301: VYVAGPLAFK PAYCPPKTT

Best Arabidopsis Sequence Match ( AT2G40340.3 )
(BLAST)

001: MPSEIVDRKR KSRGTRDVAE ILRQWREYNE QIEAESCIDG GGPKSIRKPP PKGSRKGCMK GKGGPENGIC DYRGVRQRRW GKWVAEIREP DGGARLWLGT
101: FSSSYEAALA YDEAAKAIYG QSARLNLPEI TNRSSSTAAT ATVSGSVTAF SDESEVCARE DTNASSGFGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD
201: INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST

Arabidopsis Description

DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.