Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28044313
|
gfp PMID:
28044313
doi
Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China., School of Life Sciences and State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong SAR, China., State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables, College of Horticultural Science, South China Agricultural University, Guangzhou, 510642, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22495 | Soybean | nucleus | 29.03 | 40.91 |
| KRH26854 | Soybean | nucleus | 28.67 | 40.61 |
| GSMUA_Achr5P28050_001 | Banana | nucleus | 37.99 | 39.85 |
| KRH56072 | Soybean | nucleus | 29.75 | 38.78 |
| GSMUA_Achr9P04630_001 | Banana | nucleus | 41.22 | 38.72 |
| KRH25441 | Soybean | nucleus | 27.96 | 36.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.81 | 35.64 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 24.01 | 34.36 |
| Solyc06g050520.1.1 | Tomato | nucleus | 30.47 | 28.33 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.26 | 28.21 |
| PGSC0003DMT400061541 | Potato | nucleus | 31.18 | 27.19 |
| GSMUA_Achr6P32780_001 | Banana | nucleus | 39.07 | 26.52 |
| VIT_13s0067g01960.t01 | Wine grape | nucleus | 33.33 | 26.2 |
| Solyc05g052410.1.1 | Tomato | nucleus | 34.05 | 23.81 |
| PGSC0003DMT400069733 | Potato | nucleus | 33.33 | 22.74 |
| GSMUA_Achr3P29800_001 | Banana | mitochondrion | 15.05 | 22.34 |
| GSMUA_Achr9P18060_001 | Banana | nucleus | 20.07 | 21.79 |
| KRH73245 | Soybean | nucleus | 29.75 | 21.17 |
| KRH14906 | Soybean | nucleus | 29.75 | 21.12 |
| GSMUA_Achr3P10100_001 | Banana | nucleus | 21.15 | 20.92 |
| GSMUA_Achr5P07400_001 | Banana | nucleus | 21.15 | 20.21 |
| GSMUA_Achr7P27150_001 | Banana | nucleus | 17.92 | 19.23 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G24820_001 | EnsemblPlants:GSMUA_Achr11P24820_001 | EnsemblPlants:GSMUA_Achr11T24820_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0RV62 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31241 | PANTHER:PTHR31241:SF2 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002948C52 | SEG:seg |
Description
Putative Dehydration-responsive element-binding protein 2A [Source:GMGC_GENE;Acc:GSMUA_Achr11G24820_001]
Coordinates
chr11:+:24190862..24191963
Molecular Weight (calculated)
30576.2 Da
IEP (calculated)
4.511
GRAVY (calculated)
-0.750
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGEKPIRKP PARGSKKGCM RGKGGPENPS CRYRGVRQRT WGKWVAEIRE PNRGGRLWLG TFPTATEAAL AYDDAARAMY GSLARVNLPG AVMSKSCEST
101: TTSHHSDAIN ASVSSTGHIK VPSIEPKDKV HFPKAELDDE ELKGEAGCDK EPSSTADASN MGVCQYGDQT DAPEDEFSVE EMLRLMGDDT EVNVHDQFGT
201: VHADTNWQCF SPSGMSSGFQ NPDATTLGSL WRTEENPFDC KDSLLWPWVD DQDKGPEEAI ETSEFGVSYG DFLSSPNIW
101: TTSHHSDAIN ASVSSTGHIK VPSIEPKDKV HFPKAELDDE ELKGEAGCDK EPSSTADASN MGVCQYGDQT DAPEDEFSVE EMLRLMGDDT EVNVHDQFGT
201: VHADTNWQCF SPSGMSSGFQ NPDATTLGSL WRTEENPFDC KDSLLWPWVD DQDKGPEEAI ETSEFGVSYG DFLSSPNIW
001: MKTSSCSYFG VITFRKRKSR GTRDVAEILR QWREYNEQIE AESCIDGGGP KSIRKPPPKG SRKGCMKGKG GPENGICDYR GVRQRRWGKW VAEIREPDGG
101: ARLWLGTFSS SYEAALAYDE AAKAIYGQSA RLNLPEITNR SSSTAATATV SGSVTAFSDE SEVCAREDTN ASSGFGQVKL EDCSDEYVLL DSSQCIKEEL
201: KGKEEVREEH NLAVGFGIGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA
301: QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST
101: ARLWLGTFSS SYEAALAYDE AAKAIYGQSA RLNLPEITNR SSSTAATATV SGSVTAFSDE SEVCAREDTN ASSGFGQVKL EDCSDEYVLL DSSQCIKEEL
201: KGKEEVREEH NLAVGFGIGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA
301: QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST
Arabidopsis Description
DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [mitochondrion,plastid,nucleus]
SUBAcon: [mitochondrion,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.