Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P00320_001 | Banana | nucleus | 66.34 | 68.72 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 47.03 | 49.22 |
| TraesCS2B01G529200.1 | Wheat | plastid | 46.04 | 48.19 |
| Os08t0565200-01 | Rice | nucleus | 52.48 | 46.09 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 51.49 | 45.22 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 51.49 | 44.83 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 50.99 | 44.59 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 51.49 | 41.94 |
| PGSC0003DMT400073853 | Potato | nucleus | 32.18 | 40.37 |
| Solyc04g050750.1.1 | Tomato | nucleus | 31.19 | 39.13 |
| CDY39036 | Canola | nucleus | 34.65 | 35.35 |
| Bra008200.1-P | Field mustard | nucleus | 34.65 | 35.35 |
| CDY20377 | Canola | nucleus | 34.16 | 34.85 |
| AT1G75490.1 | Thale cress | nucleus | 35.15 | 34.47 |
| CDX68128 | Canola | nucleus | 34.65 | 34.31 |
| CDY70626 | Canola | nucleus | 34.65 | 34.31 |
| Bra003752.1-P | Field mustard | nucleus | 34.65 | 34.31 |
| Bra015840.1-P | Field mustard | nucleus, plastid | 33.66 | 33.01 |
| CDY47519 | Canola | nucleus | 33.66 | 33.01 |
| VIT_18s0001g13320.t01 | Wine grape | nucleus | 32.67 | 32.84 |
| CDY64211 | Canola | nucleus, plastid | 33.17 | 32.52 |
| KRH61095 | Soybean | nucleus | 38.61 | 31.84 |
| KRH51773 | Soybean | nucleus | 38.61 | 31.33 |
| Zm00001d049889_P001 | Maize | nucleus | 52.97 | 30.4 |
| Zm00001d031861_P001 | Maize | nucleus | 52.97 | 29.8 |
| Solyc04g080910.1.1 | Tomato | nucleus | 34.16 | 27.82 |
| OQU80673 | Sorghum | nucleus | 52.48 | 27.32 |
| CDX70820 | Canola | nucleus | 37.62 | 27.14 |
| PGSC0003DMT400009506 | Potato | nucleus | 35.15 | 27.1 |
| EER92302 | Sorghum | nucleus | 46.53 | 26.78 |
| KRH05892 | Soybean | nucleus | 37.13 | 26.13 |
| Bra006460.1-P | Field mustard | nucleus | 37.62 | 26.12 |
| Bra023674.1-P | Field mustard | nucleus | 37.13 | 26.04 |
| GSMUA_Achr11P... | Banana | nucleus | 35.64 | 25.81 |
| KRH15125 | Soybean | nucleus | 36.14 | 25.8 |
| CDY02629 | Canola | nucleus | 36.63 | 25.69 |
| CDY58117 | Canola | nucleus | 36.63 | 25.61 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.6 | 25.08 |
| CDX92610 | Canola | nucleus | 37.62 | 24.84 |
| Bra002159.1-P | Field mustard | nucleus | 37.62 | 24.84 |
| GSMUA_Achr5P28050_001 | Banana | nucleus | 32.18 | 24.44 |
| AT5G18450.1 | Thale cress | nucleus | 36.63 | 24.1 |
| CDY25420 | Canola | nucleus | 37.62 | 23.17 |
| GSMUA_Achr9P04630_001 | Banana | nucleus | 33.17 | 22.56 |
| GSMUA_Achr9P18060_001 | Banana | nucleus | 27.72 | 21.79 |
| GSMUA_Achr3P10100_001 | Banana | nucleus | 29.21 | 20.92 |
| GSMUA_Achr5P07400_001 | Banana | nucleus | 29.7 | 20.55 |
| GSMUA_Achr3P29800_001 | Banana | mitochondrion | 18.81 | 20.21 |
| GSMUA_Achr6P32780_001 | Banana | nucleus | 34.65 | 17.03 |
| GSMUA_Achr7P27150_001 | Banana | nucleus | 17.82 | 13.85 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_AchrUn_randomG08690_001 | EnsemblPlants:GSMUA_AchrUn_randomP08690_001 | EnsemblPlants:GSMUA_AchrUn_randomT08690_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0U7H9 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31241 | PANTHER:PTHR31241:SF2 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000296F29A | SEG:seg |
Description
Dehydration-responsive element-binding protein 2C [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08690_001]
Coordinates
chrchrUn_random:+:40125652..40126260
Molecular Weight (calculated)
22117.6 Da
IEP (calculated)
6.504
GRAVY (calculated)
-0.655
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPQEKQPRK CCPLRRSRKG CMKGKGGPEN QACTYRGVRQ RTWGKWVAEI REPNRGARLW LGTFSTALEA AQAYDNAARS LYGDCARLNL SDSRPSSVGD
101: NSTGSTPPPP AAALVKPDFR CSSSWSNETS TGDSQASFPD SIGLPAAHFY AGGLYSFDDY VSGLPKPEDF GLEAFHSVPF LDEQELDTQF MNFEPLQVSS
201: YS
101: NSTGSTPPPP AAALVKPDFR CSSSWSNETS TGDSQASFPD SIGLPAAHFY AGGLYSFDDY VSGLPKPEDF GLEAFHSVPF LDEQELDTQF MNFEPLQVSS
201: YS
001: MEEEQPPAKK RNMGRSRKGC MKGKGGPENA TCTFRGVRQR TWGKWVAEIR EPNRGTRLWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLV HPQQQQQVVV
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF
Arabidopsis Description
DREB2GDehydration-responsive element-binding protein 2G [Source:UniProtKB/Swiss-Prot;Acc:P61827]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.