Factsheet for PGSC0003DMT400073853

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g050750.1.1	Tomato	nucleus	80.12	80.12
PGSC0003DMT400041067	Potato	nucleus	33.54	45.76
GSMUA_Achr3P00320_001	Banana	nucleus	40.37	33.33
GSMUA_AchrUn_...	Banana	nucleus	40.37	32.18
HORVU2Hr1G111510.1	Barley	nucleus	37.27	31.09
TraesCS2B01G529200.1	Wheat	plastid	36.65	30.57
Os08t0565200-01	Rice	nucleus	39.75	27.83
TraesCS1B01G256000.1	Wheat	nucleus	39.13	27.39
TraesCS1A01G244800.1	Wheat	nucleus	39.13	27.16
TraesCS1D01G244500.1	Wheat	nucleus	38.51	26.84
CDX70820	Canola	nucleus	44.72	25.71
CDY02629	Canola	nucleus	45.96	25.69
Bra023674.1-P	Field mustard	nucleus	45.96	25.69
CDY58117	Canola	nucleus	45.96	25.61
PGSC0003DMT400009506	Potato	nucleus	41.61	25.57
HORVU1Hr1G063100.1	Barley	nucleus	39.13	25.4
Bra006460.1-P	Field mustard	nucleus	44.72	24.74
Bra002159.1-P	Field mustard	nucleus	44.72	23.53
CDX92610	Canola	nucleus	44.72	23.53
AT5G18450.1	Thale cress	nucleus	44.72	23.45
CDY25420	Canola	nucleus	44.72	21.95
PGSC0003DMT400060970	Potato	nucleus	42.24	21.73
PGSC0003DMT400061541	Potato	nucleus	39.13	19.69
PGSC0003DMT400085168	Potato	nucleus	34.16	18.97
Zm00001d049889_P001	Maize	nucleus	39.13	17.9
Zm00001d031861_P001	Maize	nucleus	39.75	17.83
PGSC0003DMT400092312	Potato	nucleus	33.54	17.2
OQU80673	Sorghum	nucleus	39.75	16.49
EER92302	Sorghum	nucleus	35.4	16.24
PGSC0003DMT400069733	Potato	nucleus	39.75	15.65
PGSC0003DMT400041064	Potato	nucleus	39.75	14.0
PGSC0003DMT400041065	Potato	nucleus	34.16	12.56

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
UniProt:M1CSS8	PFAM:PF00847	EnsemblPlantsGene:PGSC0003DMG400028700	PGSC:PGSC0003DMG400028700	EnsemblPlants:PGSC0003DMT400073853	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF18	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000295D4CA	SEG:seg	:	:	:	:

Description

Dehydration-responsive element-binding protein 2G [Source:PGSC_GENE;Acc:PGSC0003DMG400028700]

Coordinates

chr4:+:46420594..46421310

Molecular Weight (calculated)

18054.0 Da

IEP (calculated)

4.447

GRAVY (calculated)

-0.565

Length

161 amino acids

Sequence
(BLAST)

001: MAECVESKKS IVGRSRKGCM RGKGGPENAL CTYRGVRQRT WGKWVAEIRE PNRGARIWLG TFNTSVEAAR AYDDAARRLY GSDAKLNLSE EEESIISSDT
101: EISCMENNII EECSVLEEAS IFKDGNGEYL VWDTPAPNLL GLDFHGDATS FNWTDEPEIM Y

Best Arabidopsis Sequence Match ( AT5G18450.1 )
(BLAST)

001: MEEEQPPAKK RNMGRSRKGC MKGKGGPENA TCTFRGVRQR TWGKWVAEIR EPNRGTRLWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLV HPQQQQQVVV
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF

Arabidopsis Description

DREB2GDehydration-responsive element-binding protein 2G [Source:UniProtKB/Swiss-Prot;Acc:P61827]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.