Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006460.1-P | Field mustard | nucleus | 97.86 | 94.16 |
| CDY58117 | Canola | nucleus | 78.93 | 76.47 |
| CDY02629 | Canola | nucleus | 78.57 | 76.39 |
| CDX92610 | Canola | nucleus | 79.64 | 72.88 |
| AT5G18450.1 | Thale cress | nucleus | 75.0 | 68.4 |
| CDY25420 | Canola | nucleus | 78.57 | 67.07 |
| CDY33815 | Canola | nucleus | 20.36 | 49.57 |
| PGSC0003DMT400073853 | Potato | nucleus | 25.71 | 44.72 |
| Solyc04g050750.1.1 | Tomato | nucleus | 25.36 | 44.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.14 | 37.62 |
| CDY47519 | Canola | nucleus | 27.14 | 36.89 |
| CDY39036 | Canola | nucleus | 26.07 | 36.87 |
| CDX68128 | Canola | nucleus | 26.79 | 36.76 |
| CDY70626 | Canola | nucleus | 26.43 | 36.27 |
| CDY20377 | Canola | nucleus | 25.36 | 35.86 |
| CDY64211 | Canola | nucleus, plastid | 26.07 | 35.44 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 24.64 | 35.38 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 24.29 | 35.23 |
| TraesCS2B01G529200.1 | Wheat | plastid | 23.21 | 33.68 |
| Os08t0565200-01 | Rice | nucleus | 27.5 | 33.48 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 27.14 | 33.04 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 27.14 | 32.76 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 26.79 | 32.47 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 27.14 | 30.65 |
| CDX93190 | Canola | nucleus | 22.86 | 30.05 |
| CDY71905 | Canola | nucleus | 23.93 | 27.46 |
| CDY54455 | Canola | nucleus | 23.57 | 26.72 |
| CDY06088 | Canola | nucleus | 25.71 | 26.67 |
| CDX72012 | Canola | nucleus | 25.71 | 26.37 |
| CDX88955 | Canola | nucleus | 24.29 | 26.15 |
| CDY52095 | Canola | nucleus | 23.57 | 24.81 |
| CDY36289 | Canola | nucleus | 25.0 | 24.05 |
| CDY67039 | Canola | nucleus | 24.64 | 23.63 |
| CDY08557 | Canola | nucleus | 26.07 | 23.25 |
| CDY00987 | Canola | nucleus | 25.71 | 23.15 |
| CDY52149 | Canola | nucleus | 26.07 | 22.26 |
| CDY04950 | Canola | nucleus | 25.71 | 22.22 |
| CDY61527 | Canola | nucleus | 23.21 | 22.11 |
| CDX98843 | Canola | nucleus | 26.07 | 21.86 |
| CDX70151 | Canola | nucleus | 25.71 | 21.82 |
| Zm00001d049889_P001 | Maize | nucleus | 26.79 | 21.31 |
| Zm00001d031861_P001 | Maize | nucleus | 27.14 | 21.17 |
| CDY52924 | Canola | nucleus | 24.64 | 20.54 |
| EER92302 | Sorghum | nucleus | 25.0 | 19.94 |
| OQU80673 | Sorghum | nucleus | 27.5 | 19.85 |
| CDY52427 | Canola | nucleus | 22.86 | 19.81 |
| CDX73896 | Canola | nucleus | 26.07 | 19.11 |
| CDY07614 | Canola | nucleus | 22.5 | 18.75 |
| CDY54991 | Canola | nucleus | 22.14 | 18.4 |
| CDY33814 | Canola | nucleus | 2.5 | 8.05 |
| CDY00719 | Canola | nucleus | 5.36 | 6.33 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078C1P4 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX70820 |
| ProteinID:CDX70820 | ProteinID:CDX70820.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00140705001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF17 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE417F | SEG:seg | : | : | : | : |
Description
BnaC03g09040D
Coordinates
chrLK031791:-:2186007..2186849
Molecular Weight (calculated)
31220.5 Da
IEP (calculated)
6.917
GRAVY (calculated)
-0.775
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSRKGCMK GKGGPENATC TFRGVRQRTW GKWVAEIREP NRGTRLWLGT FNTSVQAAMA YDEAAMKLYG PEARLNLLQP QQKQKQEVKR NLSFSDHGSG
101: SWSYKLDTIR GLDLGLGPSN GSRGSWSGSF SIPREDDHHN VSWLLPKRSS SQDQESVNDA SGLAFSNKMQ PRNLMMTPKN GSSNGVWSRF LVGQEKKTEY
201: DVSSSCGSSD NKESILVPSG SGGEGMSRPE VEVEVGTGYL EMDDLLEIDD LGLLIGKDGD FKNWCCDEFQ HPWNWFSERF
101: SWSYKLDTIR GLDLGLGPSN GSRGSWSGSF SIPREDDHHN VSWLLPKRSS SQDQESVNDA SGLAFSNKMQ PRNLMMTPKN GSSNGVWSRF LVGQEKKTEY
201: DVSSSCGSSD NKESILVPSG SGGEGMSRPE VEVEVGTGYL EMDDLLEIDD LGLLIGKDGD FKNWCCDEFQ HPWNWFSERF
001: MEEEQPPAKK RNMGRSRKGC MKGKGGPENA TCTFRGVRQR TWGKWVAEIR EPNRGTRLWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLV HPQQQQQVVV
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF
Arabidopsis Description
DREB2GDehydration-responsive element-binding protein 2G [Source:UniProtKB/Swiss-Prot;Acc:P61827]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.