Factsheet for AT5G18450.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023674.1-P	Field mustard	nucleus	76.22	81.25
CDY58117	Canola	nucleus	74.92	79.58
CDY02629	Canola	nucleus	74.27	79.17
Bra002159.1-P	Field mustard	nucleus	76.87	77.12
CDX92610	Canola	nucleus	76.87	77.12
Bra006460.1-P	Field mustard	nucleus	71.66	75.6
CDX70820	Canola	nucleus	68.4	75.0
CDY25420	Canola	nucleus	76.87	71.95
PGSC0003DMT400073853	Potato	nucleus	23.45	44.72
Solyc04g050750.1.1	Tomato	nucleus	23.13	44.1
GSMUA_AchrUn_...	Banana	nucleus	24.1	36.63
AT2G40350.2	Thale cress	nucleus	19.54	36.59
AT1G75490.1	Thale cress	nucleus	23.78	35.44
HORVU2Hr1G111510.1	Barley	nucleus	22.15	35.23
GSMUA_Achr3P00320_001	Banana	nucleus	22.15	34.87
TraesCS2B01G529200.1	Wheat	plastid	21.17	33.68
TraesCS1B01G256000.1	Wheat	nucleus	24.43	32.61
TraesCS1A01G244800.1	Wheat	nucleus	24.43	32.33
TraesCS1D01G244500.1	Wheat	nucleus	24.1	32.03
Os08t0565200-01	Rice	nucleus	23.78	31.74
HORVU1Hr1G063100.1	Barley	nucleus	24.76	30.65
AT2G38340.1	Thale cress	nucleus	21.82	27.46
AT3G57600.1	Thale cress	nucleus	22.15	24.55
AT5G05410.1	Thale cress	nucleus	23.78	21.79
Zm00001d049889_P001	Maize	nucleus	24.43	21.31
AT3G11020.1	Thale cress	nucleus	22.8	21.21
Zm00001d031861_P001	Maize	nucleus	24.76	21.17
EER92302	Sorghum	nucleus	23.45	20.51
AT2G40340.6	Thale cress	mitochondrion, nucleus, plastid	23.13	20.4
AT2G40220.1	Thale cress	nucleus	21.17	19.82
OQU80673	Sorghum	nucleus	24.76	19.59

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	EntrezGene:831963	EMBL:AC051626	ProteinID:AED92565.1	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ArrayExpress:AT5G18450	EnsemblPlantsGene:AT5G18450	RefSeq:AT5G18450	TAIR:AT5G18450	RefSeq:AT5G18450-TAIR-G
EnsemblPlants:AT5G18450.1	TAIR:AT5G18450.1	EMBL:AY560853	Unigene:At.64239	EMBL:BT026074	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
GO:GO:0044212	GO:GO:0045893	InterPro:IPR001471	InterPro:IPR036955	RefSeq:NP_197346.1	UniProt:P61827
PFAM:PF00847	PO:PO:0009001	PO:PO:0009005	PO:PO:0009010	PO:PO:0009047	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF17	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00001624CD
SEG:seg	:	:	:	:	:

Description

DREB2GDehydration-responsive element-binding protein 2G [Source:UniProtKB/Swiss-Prot;Acc:P61827]

Coordinates

chr5:-:6116024..6117041

Molecular Weight (calculated)

34235.8 Da

IEP (calculated)

6.773

GRAVY (calculated)

-0.847

Length

307 amino acids

Sequence
(BLAST)

001: MEEEQPPAKK RNMGRSRKGC MKGKGGPENA TCTFRGVRQR TWGKWVAEIR EPNRGTRLWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLV HPQQQQQVVV
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.