Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67039 | Canola | nucleus | 60.61 | 68.49 |
| Bra034159.1-P | Field mustard | nucleus | 60.0 | 68.28 |
| CDY36289 | Canola | nucleus | 59.7 | 67.7 |
| CDY00987 | Canola | nucleus | 60.3 | 63.99 |
| Bra029889.1-P | Field mustard | nucleus | 60.0 | 63.06 |
| CDY08557 | Canola | nucleus | 58.79 | 61.78 |
| AT5G05410.1 | Thale cress | nucleus | 55.45 | 54.63 |
| CDX73896 | Canola | nucleus | 60.91 | 52.62 |
| Bra001386.1-P | Field mustard | nucleus | 60.3 | 51.82 |
| AT2G40350.2 | Thale cress | nucleus | 23.33 | 46.95 |
| CDY00719 | Canola | nucleus | 26.67 | 37.13 |
| AT2G40340.6 | Thale cress | mitochondrion, nucleus, plastid | 32.42 | 30.75 |
| AT2G38340.1 | Thale cress | nucleus | 22.42 | 30.33 |
| HORVU6Hr1G050500.2 | Barley | nucleus | 27.27 | 30.0 |
| HORVU6Hr1G050520.2 | Barley | nucleus | 20.61 | 28.69 |
| AT1G75490.1 | Thale cress | nucleus | 17.27 | 27.67 |
| KXG21735 | Sorghum | nucleus | 27.88 | 27.38 |
| Zm00001d010048_P004 | Maize | nucleus | 29.09 | 26.16 |
| TraesCS1B01G235100.2 | Wheat | nucleus | 29.09 | 24.74 |
| TraesCS1D01G223600.2 | Wheat | nucleus | 29.09 | 24.55 |
| AT3G57600.1 | Thale cress | nucleus | 20.61 | 24.55 |
| TraesCS1A01G221900.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 28.79 | 23.34 |
| AT5G18450.1 | Thale cress | nucleus | 21.21 | 22.8 |
| HORVU1Hr1G060490.5 | Barley | plasma membrane | 30.0 | 21.9 |
| AT2G40220.1 | Thale cress | nucleus | 19.39 | 19.51 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:820273 | ProteinID:AAF01519.1 | EMBL:AB007791 | ProteinID:AEE74994.1 |
| EMBL:AK117363 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT3G11020 | EnsemblPlantsGene:AT3G11020 | RefSeq:AT3G11020 |
| TAIR:AT3G11020 | RefSeq:AT3G11020-TAIR-G | EnsemblPlants:AT3G11020.1 | TAIR:AT3G11020.1 | Unigene:At.234 | ProteinID:BAA36706.1 |
| EMBL:BT008351 | InterPro:DNA-bd_dom_sf | Symbol:DREB2B | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010286 |
| GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | InterPro:IPR001471 | InterPro:IPR036955 | EMBL:KC412253 |
| UniProt:M4VR86 | RefSeq:NP_187713.1 | UniProt:O82133 | PFAM:PF00847 | PO:PO:0000084 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007098 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 |
| PANTHER:PTHR31241:SF2 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00000AC0F9 | SEG:seg | : |
Description
DREB2BDehydration-responsive element-binding protein 2B [Source:UniProtKB/Swiss-Prot;Acc:O82133]
Coordinates
chr3:+:3455355..3457342
Molecular Weight (calculated)
37118.9 Da
IEP (calculated)
4.772
GRAVY (calculated)
-0.905
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVYEQTGTE QPKKRKSRAR AGGLTVADRL KKWKEYNEIV EASAVKEGEK PKRKVPAKGS KKGCMKGKGG PDNSHCSFRG VRQRIWGKWV AEIREPKIGT
101: RLWLGTFPTA EKAASAYDEA ATAMYGSLAR LNFPQSVGSE FTSTSSQSEV CTVENKAVVC GDVCVKHEDT DCESNPFSQI LDVREESCGT RPDSCTVGHQ
201: DMNSSLNYDL LLEFEQQYWG QVLQEKEKPK QEEEEIQQQQ QEQQQQQLQP DLLTVADYGW PWSNDIVNDQ TSWDPNECFD INELLGDLNE PGPHQSQDQN
301: HVNSGSYDLH PLHLEPHDGH EFNGLSSLDI
101: RLWLGTFPTA EKAASAYDEA ATAMYGSLAR LNFPQSVGSE FTSTSSQSEV CTVENKAVVC GDVCVKHEDT DCESNPFSQI LDVREESCGT RPDSCTVGHQ
201: DMNSSLNYDL LLEFEQQYWG QVLQEKEKPK QEEEEIQQQQ QEQQQQQLQP DLLTVADYGW PWSNDIVNDQ TSWDPNECFD INELLGDLNE PGPHQSQDQN
301: HVNSGSYDLH PLHLEPHDGH EFNGLSSLDI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.