Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G223600.2 | Wheat | nucleus | 86.73 | 90.28 |
| TraesCS1B01G235100.2 | Wheat | nucleus | 85.75 | 89.95 |
| HORVU1Hr1G060490.5 | Barley | plasma membrane | 84.03 | 75.66 |
| HORVU6Hr1G050500.2 | Barley | nucleus | 49.14 | 66.67 |
| HORVU6Hr1G050520.2 | Barley | nucleus | 36.61 | 62.87 |
| Zm00001d010048_P004 | Maize | nucleus | 47.17 | 52.32 |
| KXG21735 | Sorghum | nucleus | 43.0 | 52.08 |
| CDY36289 | Canola | nucleus | 25.8 | 36.08 |
| TraesCS3A01G099200.1 | Wheat | nucleus | 24.57 | 35.97 |
| CDY67039 | Canola | nucleus | 25.8 | 35.96 |
| Bra034159.1-P | Field mustard | nucleus | 25.31 | 35.52 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 20.15 | 35.34 |
| CDY00987 | Canola | nucleus | 26.04 | 34.08 |
| CDY08557 | Canola | nucleus | 26.29 | 34.08 |
| Bra029889.1-P | Field mustard | nucleus | 26.29 | 34.08 |
| Bra028759.1-P | Field mustard | nucleus | 24.57 | 32.79 |
| CDY52149 | Canola | nucleus | 25.8 | 32.01 |
| Bra005852.1-P | Field mustard | nucleus | 25.31 | 31.4 |
| CDY04950 | Canola | nucleus | 24.82 | 31.17 |
| AT5G05410.1 | Thale cress | nucleus | 25.31 | 30.75 |
| CDX70151 | Canola | nucleus | 24.82 | 30.61 |
| Bra009112.1-P | Field mustard | nucleus | 24.82 | 30.61 |
| CDX98843 | Canola | nucleus | 25.06 | 30.54 |
| AT3G11020.1 | Thale cress | nucleus | 23.34 | 28.79 |
| Bra001386.1-P | Field mustard | nucleus | 24.08 | 25.52 |
| CDX73896 | Canola | nucleus | 23.83 | 25.39 |
| TraesCS4A01G013600.1 | Wheat | nucleus | 17.2 | 21.88 |
| TraesCS1A01G223400.1 | Wheat | nucleus | 13.76 | 21.54 |
| CDY00719 | Canola | nucleus | 5.41 | 9.28 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF16 | SMART:SM00380 |
| SUPFAM:SSF54171 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS1A01G221900 | EnsemblPlants:TraesCS1A01G221900.1 | TIGR:cd00018 | SEG:seg |
Description
No Description!
Coordinates
chr1A:-:391257064..391259159
Molecular Weight (calculated)
44451.4 Da
IEP (calculated)
4.747
GRAVY (calculated)
-0.396
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCLSVLLVY PVSDMSCLTV LLVNPVSDMC CPVCLFFSVT RTCGAEESTR SHVLVKPIGS SNLPCNEYAF LARQNPKGDA LPVASILRKK RPRRSRDGPN
101: SVSETIRRWK EVNQQLEHDP QGAKRARKPP AKGSKKGCMQ GKGGPENTQC GFRGVRQRTW GKWVAEIREP NRVSRLWLGT FPTAEDAARA YDEAARAMYG
201: ALARTNFPAH PAQAPAVALP AAIEGVVRGA SASCESTTTS ANHSDVASNL PRQAQALEIY SQPDVLESTE SVVLESVEHY SHKDTVPDAG SSIARSTSEE
301: DVFEPLEPIS SLPDGEADGF DIEELLRLME ADPIEVEPVT GGSWNCGTNT GVEMGLQEPL YLDGLDQGML EGMLQADYPY PMWISEDRAM RNPAFHDAEM
401: SEFFEGL
101: SVSETIRRWK EVNQQLEHDP QGAKRARKPP AKGSKKGCMQ GKGGPENTQC GFRGVRQRTW GKWVAEIREP NRVSRLWLGT FPTAEDAARA YDEAARAMYG
201: ALARTNFPAH PAQAPAVALP AAIEGVVRGA SASCESTTTS ANHSDVASNL PRQAQALEIY SQPDVLESTE SVVLESVEHY SHKDTVPDAG SSIARSTSEE
301: DVFEPLEPIS SLPDGEADGF DIEELLRLME ADPIEVEPVT GGSWNCGTNT GVEMGLQEPL YLDGLDQGML EGMLQADYPY PMWISEDRAM RNPAFHDAEM
401: SEFFEGL
001: MPSEIVDRKR KSRGTRDVAE ILRQWREYNE QIEAESCIDG GGPKSIRKPP PKGSRKGCMK GKGGPENGIC DYRGVRQRRW GKWVAEIREP DGGARLWLGT
101: FSSSYEAALA YDEAAKAIYG QSARLNLPEI TNRSSSTAAT ATVSGSVTAF SDESEVCARE DTNASSGFGQ VKLEDCSDEY VLLDSSQCIK EELKGKEEVR
201: EEHNLAVGFG IGQDSKRETL DAWLMGNGNE QEPLEFGVDE TFDINELLGI LNDNNVSGQE TMQYQVDRHP NFSYQTQFPN SNLLGSLNPM EIAQPGVDYG
301: CPYVQPSDME NYGIDLDHRR FNDLDIQDLD FGGDKDVHGS T
101: FSSSYEAALA YDEAAKAIYG QSARLNLPEI TNRSSSTAAT ATVSGSVTAF SDESEVCARE DTNASSGFGQ VKLEDCSDEY VLLDSSQCIK EELKGKEEVR
201: EEHNLAVGFG IGQDSKRETL DAWLMGNGNE QEPLEFGVDE TFDINELLGI LNDNNVSGQE TMQYQVDRHP NFSYQTQFPN SNLLGSLNPM EIAQPGVDYG
301: CPYVQPSDME NYGIDLDHRR FNDLDIQDLD FGGDKDVHGS T
Arabidopsis Description
DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.