Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G050970.1 | Barley | cytosol | 66.67 | 98.05 |
| TraesCS1A01G195500.2 | Wheat | plastid | 96.3 | 96.04 |
| Os10t0577700-01 | Rice | plastid | 80.16 | 80.8 |
| EER94425 | Sorghum | plastid | 80.69 | 78.81 |
| Zm00001d030109_P002 | Maize | plastid | 81.22 | 76.75 |
| KRH74369 | Soybean | plastid | 49.47 | 50.68 |
| VIT_02s0012g01800.t01 | Wine grape | plastid | 47.88 | 48.79 |
| GSMUA_Achr2P12160_001 | Banana | plastid | 50.0 | 48.71 |
| AT2G35500.1 | Thale cress | plastid | 48.41 | 47.29 |
| Bra017318.1-P | Field mustard | plastid | 47.88 | 46.65 |
| CDY32125 | Canola | plastid | 47.88 | 46.65 |
| PGSC0003DMT400038338 | Potato | plastid | 45.5 | 45.14 |
| Solyc08g076410.2.1 | Tomato | plastid | 45.5 | 44.56 |
| KRH49412 | Soybean | cytosol | 26.98 | 43.59 |
| CDY61809 | Canola | cytosol | 21.16 | 33.9 |
| CDX94450 | Canola | cytosol | 20.11 | 32.48 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G199100.1 | EnsemblPlantsGene:TraesCS1D01G199100 | Gene3D:2.60.40.790 | Gene3D:3.40.50.300 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:CS_dom | InterPro:HSP20-like_chaperone |
| InterPro:IPR007052 | InterPro:IPR008978 | InterPro:Shikimate/glucono_kinase | KEGG:00400+2.7.1.71 | PANTHER:PTHR21087 | PANTHER:PTHR21087:SF11 |
| PFAM:PF01202 | PFscan:PS51203 | SUPFAM:SSF49764 | TIGR:cd06467 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1D:+:281399609..281402244
Molecular Weight (calculated)
41099.6 Da
IEP (calculated)
5.479
GRAVY (calculated)
-0.160
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAMFIAATT CCSSSSFPAN HSRHIATYSR ASRLPLHRPA WRRSLLAASP PASRLRFRPR TSLSASPAAA HDYEFTDTNG EVELRLDIGK LGIESSRDVF
101: VDVDDMSLLI RAKSDGTLRT LMNVGTLFDR VKSSETIWFI DEDQLVVNLK KVEQELKWPD IDESWKSLTA GITQLLTGIS VHIVGDSTDI NEAVAKEIAE
201: GIGYLPVCTS ELLESATQKS VDTWAASEGV DSVAEAECVV LESLSSHVRT VVATLGGKQG AASRFDKWQY LHSGFTVWLS VSEAGDEASA KEEARRSVST
301: VSVAYAKADV VVKLGGWDPE YTRAVAQGCL VALKQLTLAD KKLAGKKSLY IRLGCRGDWP NIEPPGWDPQ SDAPPTNI
101: VDVDDMSLLI RAKSDGTLRT LMNVGTLFDR VKSSETIWFI DEDQLVVNLK KVEQELKWPD IDESWKSLTA GITQLLTGIS VHIVGDSTDI NEAVAKEIAE
201: GIGYLPVCTS ELLESATQKS VDTWAASEGV DSVAEAECVV LESLSSHVRT VVATLGGKQG AASRFDKWQY LHSGFTVWLS VSEAGDEASA KEEARRSVST
301: VSVAYAKADV VVKLGGWDPE YTRAVAQGCL VALKQLTLAD KKLAGKKSLY IRLGCRGDWP NIEPPGWDPQ SDAPPTNI
001: MAAFASGLAI IFNSPSLNPV TTQATFLSSN RIRSSPRVFS GFHSLRRRGF RRFSQNVIPD RFNSFSCNCL SAVSTSTIDY EFTDGGKEVE LRLRLKTGEI
101: LSPKDISVDA DGTSLAVKEK RNGLLITLLE TNHLFEKIMP SETIWYIDED QLVVNMKKVD GELKWPDIVE SWESLTAGMM QLLKGASIYI VGDSTEINQK
201: VSRELAVGLG YSPLDSKELL ESFSKQTIDS WILAEGPDSV AEAESSVLES LSSHVRTVVS TLGGKHGAAG RADQWRHLYS GFTVWVSQTE ATDEESAKEE
301: ARRSKQEREI GYSNADVVVK LQGWDPTHAK SVAQASLSAL KQLIISDKGL PGKKSLYIRL GCRGDWPNIK PPGWDPSSDT GPHPQFT
101: LSPKDISVDA DGTSLAVKEK RNGLLITLLE TNHLFEKIMP SETIWYIDED QLVVNMKKVD GELKWPDIVE SWESLTAGMM QLLKGASIYI VGDSTEINQK
201: VSRELAVGLG YSPLDSKELL ESFSKQTIDS WILAEGPDSV AEAESSVLES LSSHVRTVVS TLGGKHGAAG RADQWRHLYS GFTVWVSQTE ATDEESAKEE
301: ARRSKQEREI GYSNADVVVK LQGWDPTHAK SVAQASLSAL KQLIISDKGL PGKKSLYIRL GCRGDWPNIK PPGWDPSSDT GPHPQFT
Arabidopsis Description
SKL2Probable inactive shikimate kinase like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82290]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.