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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • plastid 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome, plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G190200.2
TraesCS1B01G192300.3
TraesCS1D01G194300.1
TraesCS2A01G327600.1
TraesCS2B01G354400.1
TraesCS2D01G335300.1
TraesCS4A01G113900.1
TraesCS4B01G190200.1
TraesCS4D01G191600.1
TraesCS6A01G207600.3
TraesCS6B01G236300.4
TraesCS6D01G191300.1
TraesCS7D01G441700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G42490.1 TraesCS4A01G113900.1 AT1G13520.1 21798944
AT2G42490.1 TraesCS4B01G190200.1 AT1G13520.1 21798944
AT2G42490.1 TraesCS4D01G191600.1 AT1G13520.1 21798944
AT2G42490.1 TraesCS7D01G441700.1 AT1G13520.1 21798944
AT2G42490.1 TraesCS2A01G327600.1 AT2G42490.1 21798944
AT2G42490.1 TraesCS2B01G354400.1 AT2G42490.1 21798944
AT2G42490.1 TraesCS2D01G335300.1 AT2G42490.1 21798944
AT2G42490.1 TraesCS6A01G207600.3 AT2G42490.1 21798944
AT2G42490.1 TraesCS6B01G236300.4 AT2G42490.1 21798944
AT2G42490.1 TraesCS6D01G191300.1 AT2G42490.1 21798944
AT2G42490.1 TraesCS1A01G190200.2 AT5G46570.1 21798944
AT2G42490.1 TraesCS1B01G192300.3 AT5G46570.1 21798944
AT2G42490.1 TraesCS1D01G194300.1 AT5G46570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os02t0593100-00 Rice cytosol 61.29 85.62
TraesCS6D01G191300.1 Wheat peroxisome 98.31 84.99
TraesCS6A01G207600.3 Wheat peroxisome 98.0 84.73
HORVU6Hr1G053060.2 Barley peroxisome 95.85 83.53
GSMUA_Achr6P06650_001 Banana peroxisome 79.57 74.21
TraesCS2B01G354400.1 Wheat peroxisome 87.86 73.9
GSMUA_Achr10P... Banana peroxisome 79.72 73.2
Os04t0136200-00 Rice cytosol, peroxisome 66.97 71.13
KRG99420 Soybean plastid 80.49 68.59
VIT_00s0225g00090.t01 Wine grape peroxisome 81.26 68.35
KRH69629 Soybean peroxisome 79.72 68.29
KRH45608 Soybean mitochondrion 80.34 68.28
CDY47975 Canola peroxisome 80.34 67.48
CDY14839 Canola peroxisome, plastid 80.18 67.35
Solyc05g013440.2.1 Tomato peroxisome, plastid 80.18 67.27
VIT_17s0000g09100.t01 Wine grape peroxisome 80.95 66.62
AT2G42490.1 Thale cress peroxisome 79.26 66.49
Bra016871.1-P Field mustard plastid 79.88 66.07
KRH54329 Soybean plastid 78.34 65.89
Solyc08g014330.2.1 Tomato peroxisome, plastid 79.26 65.48
PGSC0003DMT400059626 Potato peroxisome 78.8 65.27
GSMUA_Achr6P12170_001 Banana peroxisome 79.88 64.76
Solyc06g071700.1.1 Tomato plastid 76.96 64.73
PGSC0003DMT400069411 Potato plastid 65.59 61.88
CDY35376 Canola plastid 79.88 48.83
CDY22564 Canola peroxisome, plastid 80.03 48.47
KRH03234 Soybean nucleus 76.04 37.84
KRH74530 Soybean cytosol 17.36 37.05
TraesCS4B01G282700.1 Wheat extracellular 24.42 23.31
TraesCS2B01G091300.1 Wheat golgi 24.42 21.69
Protein Annotations
KEGG:00260+1.4.3.21KEGG:00350+1.4.3.21KEGG:00360+1.4.3.21KEGG:00410+1.4.3.21KEGG:00950+1.4.3.21KEGG:00960+1.4.3.21
Gene3D:2.70.98.20Gene3D:3.10.450.40MapMan:50.1.4InterPro:Cu_amine_oxidaseInterPro:Cu_amine_oxidase_CInterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-regInterPro:Cu_amine_oxidase_N3GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005507
GO:GO:0008131GO:GO:0008150GO:GO:0008152GO:GO:0009308GO:GO:0048038GO:GO:0055114
InterPro:IPR036460PFAM:PF01179PFAM:PF02728PANTHER:PTHR10638PANTHER:PTHR10638:SF18SUPFAM:SSF49998
SUPFAM:SSF54416EnsemblPlantsGene:TraesCS6B01G236300EnsemblPlants:TraesCS6B01G236300.4SEG:seg::
Description
No Description!
Coordinates
chr6B:-:405085739..405092086
Molecular Weight (calculated)
72606.6 Da
IEP (calculated)
7.428
GRAVY (calculated)
-0.363
Length
651 amino acids
Sequence
(BLAST)
001: MAVSEEKAQG CRSGAAAGKA ASPVKPNSGA VMEEITDSPS TTAKASSKGI YGIPIMTRAQ RSHPLDPLSA AEIAVAVATG RAAGRTPEVR DSMRFVEVVL
101: LEPEKNVVAL ADAYFFPPFQ PSLLPRTKGG PVIPSRLPPR RARLVVYNKQ TNETSIWVVE LSEVHAATRG GHHRGKVISS EVVPDVQPAM DAMEYAECEA
201: TVKDFPPFIE AIKKRGIDDM ELVMVDAWCA GYYSDADAPN RRLGKPLIFC RTESDSPMEN GYARPVEGIH VIVDMQNNVV IEFEDRKFVP LPPPDHLRNY
301: TPGETRGGVD RSDVKPLIIS QPEGPSFRIT GSFVEWQKWN FRVGFTPKEG LVIHSVAYVD GNRGRRPIAH RLSFVEMVVP YGDPNEPHYR KNAFDAGEDG
401: LGKNAHSLKK GCDCLGYIKY FDAHFTNFTG GVETIENCVC LHEEDHGILW KHQDWRTGLA EVRRSRRLTV SFICTIANYE YGFYWHFYQD GKIESEVKLT
501: GILSLGALMP GEQRKYGTTI APSLYAPVHQ HFFVARMDMA VDCKPNEAYN QVVEVNVKVE SSGPNNMHNN AFYAEEELLQ SELQAMRDCD PSSARHWIVR
601: NTRTVNRTGQ PTGYKLIPGS NCLPFCLPEA KFLRRAGFLK HNLFFFLKPK A
Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)
001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE
Arabidopsis Description
Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.