Factsheet for VIT_17s0000g09100.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 3
peroxisome 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P06650_001	Banana	peroxisome	77.12	87.39
Os04t0476100-01	Rice	peroxisome	57.02	87.07
VIT_00s0225g00090.t01	Wine grape	peroxisome	83.82	85.66
GSMUA_Achr10P...	Banana	peroxisome	76.49	85.33
KRH54329	Soybean	plastid	80.4	82.17
TraesCS6B01G236300.4	Wheat	cytosol	66.62	80.95
PGSC0003DMT400059626	Potato	peroxisome	80.03	80.53
TraesCS6D01G191300.1	Wheat	peroxisome	76.61	80.48
Solyc08g014330.2.1	Tomato	peroxisome, plastid	80.03	80.33
HORVU6Hr1G053060.2	Barley	peroxisome	75.6	80.05
Os02t0593100-00	Rice	cytosol	47.16	80.04
Solyc06g071700.1.1	Tomato	plastid	78.13	79.84
TraesCS6A01G207600.3	Wheat	peroxisome	75.98	79.81
EES12364	Sorghum	peroxisome	78.89	79.8
TraesCS2A01G327600.1	Wheat	golgi	77.5	79.51
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	78.26	79.36
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	77.5	79.1
TraesCS2B01G354400.1	Wheat	peroxisome	77.24	78.94
PGSC0003DMT400069411	Potato	plastid	68.77	78.84
HORVU2Hr1G082420.6	Barley	cytosol	58.53	78.34
OQU89852	Sorghum	cytosol	62.58	77.83
Os04t0136200-00	Rice	cytosol, peroxisome	60.3	77.81
GSMUA_Achr6P12170_001	Banana	peroxisome	75.47	74.35
KRH03234	Soybean	nucleus	75.22	45.49
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	5.31	41.18
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	26.3	31.18
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	25.92	30.42
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	25.54	29.88
VIT_05s0094g01210.t01	Wine grape	cytosol	11.38	27.86
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	25.54	27.79
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	22.0	26.89
VIT_00s1937g00010.t01	Wine grape	extracellular, golgi	13.53	26.23

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100267280	wikigene:100267280	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	ProteinID:CCB42945
ProteinID:CCB42945.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2
InterPro:Cu_amine_oxidase_N3	UniProt:F6GSI0	EMBL:FN594950	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	EntrezGene:LOC100267280	wikigene:LOC100267280
PFAM:PF01179	PFAM:PF02727	PFAM:PF02728	PANTHER:PTHR10638	PANTHER:PTHR10638:SF18	SUPFAM:SSF49998
SUPFAM:SSF54416	TIGR:TC62336	UniParc:UPI000198521F	ArrayExpress:VIT_17s0000g09100	EnsemblPlantsGene:VIT_17s0000g09100	EnsemblPlants:VIT_17s0000g09100.t01
unigene:Vvi.12936	RefSeq:XP_002277961	RefSeq:XP_002277961.1	SEG:seg	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F6GSI0]

Coordinates

chr17:-:10672866..10682320

Molecular Weight (calculated)

87467.7 Da

IEP (calculated)

7.002

GRAVY (calculated)

-0.257

Length

791 amino acids

Sequence
(BLAST)

001: MATASKKATS CCIGDDSRSI RREAVAAAAA APSVAAAAAA AVADVEQDWS GVGVVGDGKK AALASLIRPV EPIAGASANA SVKGIQIMTR AQTCHPLDPL
101: SATEISVAVA TVRAAGATPE VRDGMRFVEV VLYEPDKHVV ALADAYFFPP FQPSLLPRTK GGPVIPSKLP PRKARLIVYN KKSNETSIWI VELSEVHAAT
201: RGGHHRGKAI TTQVVPDIQP PMDAVEYAEC EAVVKDCPLF REAMKKRGVE DMDLVMVDAW CVGYHGEADA PSRRLAKPLI FCRTESDCPM ENGYARPVEG
301: IYVVVDMQNM VVIEFEDRKL VPLPPADPLR NYTPGETRGG VDRSDVKPLQ IVQPEGPSFR VHGHYVEWQK WNFRIGFTPR EGLVIHSVAY VDGSRGRRPV
401: AHRLSFVEMV VPYGDPNEPH YRKNAFDAGE DGLGKNANSL KKGCDCLGFI KYFDAHFTNF TGGVETIENC VCLHEEDHGI LWKHQDWRTG LAEVRRSRRL
501: TASFICTVAN YEYGFFWHFY QDGRIEAEVK LTGILSLGAL QPGESRKYGT TIAPGLYAPV HQHFFIARMD MAVDCKPGEA FNQVVEVNMK VENPGKDNVH
601: NNAFYAEEKL LRSEMQAMRD CDPLSARHWI VRNTRTVNRT GQLTGYKLVP GSNCLPLAGS EAKFLRRAAF LKHNLWVTPY ARDEMFPGGE FPNQNPRVGE
701: GLATWVKQNR PLEETDIVLW YVFGLVHVPR LEDWPVMPVE RIGFMLQPHG FFNCSPAVDV PPNACELDGK DNDVKDNGVA KPIQTGLLSK I

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.