Factsheet for VIT_00s1937g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi

Predictor Summary:

extracellular 6
golgi 6
plasma membrane 5
endoplasmic reticulum 5
vacuole 5
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g01210.t01	Wine grape	cytosol	31.37	39.63
AT1G62810.1	Thale cress	extracellular, plasma membrane	54.9	31.46
Bra034523.1-P	Field mustard	extracellular, vacuole	53.43	30.62
AT3G43670.1	Thale cress	extracellular, vacuole	51.47	30.57
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	52.7	29.57
CDY32205	Canola	extracellular, vacuole	46.32	29.26
CDY25701	Canola	cytosol	38.73	27.92
GSMUA_Achr1P19790_001	Banana	extracellular, vacuole	40.93	24.1
VIT_05s0020g03260.t01	Wine grape	extracellular, vacuole	37.5	22.94
VIT_05s0020g03280.t01	Wine grape	extracellular, plasma membrane	36.52	22.11
VIT_05s0020g03320.t01	Wine grape	extracellular, plasma membrane	36.27	21.89
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	32.35	20.4
VIT_00s0225g00090.t01	Wine grape	peroxisome	26.23	13.82
VIT_17s0000g09100.t01	Wine grape	peroxisome	26.23	13.53
CDY69801	Canola	cytosol	0.74	1.89
VIT_00s1682g00010.t01	Wine grape	cytosol, peroxisome	0.0	0.0

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
EntrezGene:100853400	wikigene:100853400	Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:35.1	ProteinID:CCB59201
ProteinID:CCB59201.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2
InterPro:Cu_amine_oxidase_N3	EMBL:FN596410	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507
GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491	GO:GO:0046872
GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	EntrezGene:LOC100853400	wikigene:LOC100853400	PFAM:PF01179
PFAM:PF02727	PFAM:PF02728	PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	SUPFAM:SSF49998	SUPFAM:SSF54416
SignalP:SignalP-noTM	TIGR:TC61928	TMHMM:TMhelix	UniParc:UPI000393C201	ArrayExpress:VIT_00s1937g00010	EnsemblPlantsGene:VIT_00s1937g00010
EnsemblPlants:VIT_00s1937g00010.t01	unigene:Vvi.1489	unigene:Vvi.26435	RefSeq:XP_003635614	RefSeq:XP_003635614.1	SEG:seg

Description

No Description!

Coordinates

chrUn:-:40742672..40744083

Molecular Weight (calculated)

45514.5 Da

IEP (calculated)

6.179

GRAVY (calculated)

-0.256

Length

408 amino acids

Sequence
(BLAST)

001: MQATSYLPFC LILLVVLVLF PCSRYPLATQ QYVGCSLTTP WCGSRNRKYW ILETQNPKSI AHSAETTHHP LDPLSIQEIN KVRAVLSSYG PFSSSFPAIQ
101: SLSLDEPEKS VVLGWKKGDS LPPRKAFVIA LLNGKTQVLL VDLDSSRVTS HSTHQGSGYP TLSMDDIQVA LRVPLSDPEF NKSIMARGVK LSDLGCISPS
201: SGWFGPDEEG RRIIKIQCGS IQDTANFYMR PIEGLTVTVD IDRKEVVRIS DTGREIPVPK GTNTDYRYTA QDRPPEMEPI NPISMEQPKG PSFRVEDGHI
301: VKWANWEFHL KADQRTGMII SQAKVRDSET GELRSVMYKG FASEMFVPYM DPDEAWYFKS YMDAGEFGLG GTALALVPLN DCPRNSYYMD GVFVASDGKP
401: FIQSNMIC

Best Arabidopsis Sequence Match ( AT4G12270.1 )
(BLAST)

001: MEPKLSSRLF LLITTACFIL LFTSTNFSQA PSSTAKLFDC TKSSSSPFCA SRNFLFNKNT RPISKNIPKT KPKNHDHVSD TPNHPLDPLT VMEINKVRSI
101: LSSHALFASR VPHLLNSVVL EEPDKNLVRQ WEKGDQLPPR KASVIARVGG NSHLLIVDLS TSRVDQADSP VPESGYPIVT SEEMDSAASA PFSNADFNRT
201: INSRGVNLTD VICIPISSGW FGNKDDNTKR VTKIQCFSTQ DTPNFYMRPI EGLTLLFDLD TKRILEITDT GQSIPIPGST NTDYRYSTLP NHDKTRPLNT
301: ISLEQPRGPS FVIEDNHLVK WANWEFHLKP DPRAGLIMSQ VKIHDPDTQE TREVMYKGFV SELFVPYMDP SEAWYFKTYM DAGEYGFGLQ AMPLEPVAEP
401: KNLFIGPLND CPRNAVYMDG TFAAADGTPY VRENMICVFE SYAGDIAWRH TEYPVNGMPN

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q9STI4]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.